| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0388 |
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| Symbol | |
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| ID | 8382653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 379705 |
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| End bp | 380871 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644971448 |
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| Product | ABC transporter, periplasmic binding protein, thiB subfamily |
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| Protein accession | YP_003129308 |
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| Protein GI | 257051475 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGAAAC GACGCACGTT TCTTCGAACG GCCGGGGTCA GTGTTCTGGG GACAACGGCA
TTGTCCGGCT GTGCTGGCGA GGACGGAACC GACACGGAAC AGACAACGGA ACCGTCGTCT
GAAACGACCG ATACGGTGAC GGCTGACGGA ACACCGCCCA CCGATACGAC GACCACTGAG
ACAACGACGA CTAGTTCGTC TTCGACGGAC ACACTGACGG TGGCGACGTA CTCCTCGTTC
ACCGGTGAGG ATACCGCCGG AAACTGGCTC AAGTCCGCCT TCGAGGCAGA GTATCCGGAC
AAAACCGTCG AGTTCACGAC ACCGGAGAAC GGCCTCAATC AGTATATTCT GCGCCAACAG
GAGGGTGCCG GGATCGACGC CGATCTCTAC GTTGGACTCA ATACGTCCGA ACTCGTCAGA
GCCGACCAGG AAATCGATGG ATCGCTGTTT CAGACGGTCC AGGATGATCT TGCCCGGGCT
GGCAACGTCA AATCGGGTCT CGAAATCGAT CCGGACGGCC GGGCGATCAC CTACGATACG
GGATATATCT CGCTGGTCTA CAACGGCAAC GAGGTCCAGA ACCCGGCGAC CTTCGACGCG
CTAACGAGCG ACCAATATCA GGGAGATCTT ATCGTACAGA ACGCCCAGCA GTCCGATCCC
GGACGGGCGT TTCTCCTTTG GACCATCGCC CAGAAGGGAA CTGACGGCTA TCTGGAGTAC
TGGCAGGATC TCGTCGATAA CGACGTGACG ATCCTCTCGG ACTGGGAACC TGCCTATCAG
GCCTACATGA ACGACGAAGC GCCGATGGTG GTTTCCTATT CGACCGATCA GGTGTATTAT
CACGGCGAAG GTGTCGACAT CCAGAAACAC CAGGTCGGTT TCCTGAACGA CCAGGGGTAC
GCCAACCCTG AAGCGATGGC GCTGTTCGAT GACGCAGATG CCCCGGAACT CGGCCGGGAG
TTCATGGACT TCGTGCTCTC CCCGAAGGCA CAGTCCGAGA TCGCCGTCCG GAACGTTCAG
TTCCCCGCTG TCGAGGGCGT CGACCCCGGC GAGGAGTTCT CACAGTACGC CTACGAGCCG
CCAGAGCCCG TCACCTTCAG CTACGACGAA CTGTCCGGCA ACGTCGAGGG CTGGATCGAG
GACTGGGCGC GCGAGATCGT CAACTGA
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| Protein sequence | MVKRRTFLRT AGVSVLGTTA LSGCAGEDGT DTEQTTEPSS ETTDTVTADG TPPTDTTTTE
TTTTSSSSTD TLTVATYSSF TGEDTAGNWL KSAFEAEYPD KTVEFTTPEN GLNQYILRQQ
EGAGIDADLY VGLNTSELVR ADQEIDGSLF QTVQDDLARA GNVKSGLEID PDGRAITYDT
GYISLVYNGN EVQNPATFDA LTSDQYQGDL IVQNAQQSDP GRAFLLWTIA QKGTDGYLEY
WQDLVDNDVT ILSDWEPAYQ AYMNDEAPMV VSYSTDQVYY HGEGVDIQKH QVGFLNDQGY
ANPEAMALFD DADAPELGRE FMDFVLSPKA QSEIAVRNVQ FPAVEGVDPG EEFSQYAYEP
PEPVTFSYDE LSGNVEGWIE DWAREIVN
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