Gene Cpin_6612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6612 
SymbolpyrG 
ID8362800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8291617 
End bp8293269 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content47% 
IMG OID644968744 
ProductCTP synthetase 
Protein accessionYP_003126217 
Protein GI256425564 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.174922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00487095 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAT ATATCTTCGT TACGGGAGGT GTGACTTCCT CGTTGGGTAA AGGAATCATA 
GCTGCCTCGC TGGCAAAATT ATTGCAGGCT CGTGGCTTTA GAGTGACAAT TCAGAAATTC
GATCCATATA TCAATGTGGA TCCGGGCACA TTAAACCCTT ACGAGCACGG TGAGTGTTTC
GTAACTGAAG ATGGCGCTGA AACTGACCTG GACCTTGGTC ACTATGAGCG CTTCCTGAAT
ACGCCTACAT CACAGTCTAA TAACGTGACT ACAGGTCGTA TCTATCAGAC TGTTATCAAT
AAAGAACGTG AAGGCGCCTA CCTGGGTAAA ACCGTACAGG TAGTACCACA CATCACTGAC
GAAATCAAAC GTCGTATCCT CCTGTTGGGT AAAGACGGTA AACACGATAT CGTGATTACC
GAGCTGGGTG GTACCGTAGG TGATATCGAA TCACTGCCTT ATATAGAGGC GGTTCGTCAG
TTACAGTGGG AGCTGGACGA GCAGGATTGC CTGGTCGTAC ACCTGACCCT CATTCCTTAC
CTGCGTGCTG CTAAAGAGCT GAAAACCAAG CCAACACAGC ACTCCGTGAA GATGATGAGC
GAAAATGGCG TACATCCGGA TGTGATCGTT TGTCGTACAG AAGAGCCAAT GTACAATGAT
CTGAAAAAGA AAATCGCGCT GTTCTGTAAT GTGACGCCTG ATGCGGTAAT CGAAGCGACG
GACATGAGCA CCATCTATGA AGTGCCGCTG GAAATGCTGC GTGAGAAACT GGATGTGATC
TGTATGAAGA AACTCGGTAT TCCTATCGAA AAGGAACCGG ATATGACCAA ATGGCGTGCA
TTCCTGGATA AACTGAAATA TCCTAAATCC AAAGTAACCA TCGGTCTGAT CGGAAAATAT
GTGGAATTGC AGGATGCTTA TAAATCCATC CTGGAATCCT TTATCCACGC CGGTGCGATG
AACGAATGTA AAGTAGTTGT ACAGAACATT CATTCTGAGT TCCTTACACA GGAAAATGTA
GCTGAAAAAC TGCGTAACCT GGACGGTCTG CTGGTAGCAC CTGGTTTCGG TCACCGTGGT
ATCGAAGGTA AAATCGTAGC TATTCAGTAC GCTCGTGAAA ACAGCCTGCC TTTCTTTGGT
ATCTGTCTTG GTATGCAGAT GGCAGTTGTA GAATACGCCC GTAATGTAAT CGGATGGACT
GATGCGCACT CCACAGAAAT GAACCCGGAT ACCCCACACG CGGTAATCGG TCTCATGGAA
GAGCAGAAGA AAATCACCGT GAAAGGTGGT ACCATGCGTC TGGGCGCTTA TACCTGCGAA
CTGATCCCTG GTTCAAAAGC AGCGACTATC TATAACAATA CTACTATCAG CGAGCGTCAC
CGTCACCGCT ACGAATTCAA TAGCCAGTTC CTAGCCGATT TCGAAAAAGC GGGTATGGTA
CCTTCCGGCC GTAACCCGGA AAGTGGTCTG GTAGAGATGG TAGAACTGCC GGAACATCCG
TTCTTCGTAG GCTGTCAGTT CCATCCGGAG CTGAAAAGCA CTGTAGAAGC GCCTGCGCCT
TTATTCGTTC ACTTCATCGC CGCTGCCAAA CAGTACGCTG AAGACAAGAC CATTAAAGCA
AAAGTTGCAG AAGAAAAGAT CGCACACCAA TAA
 
Protein sequence
MAKYIFVTGG VTSSLGKGII AASLAKLLQA RGFRVTIQKF DPYINVDPGT LNPYEHGECF 
VTEDGAETDL DLGHYERFLN TPTSQSNNVT TGRIYQTVIN KEREGAYLGK TVQVVPHITD
EIKRRILLLG KDGKHDIVIT ELGGTVGDIE SLPYIEAVRQ LQWELDEQDC LVVHLTLIPY
LRAAKELKTK PTQHSVKMMS ENGVHPDVIV CRTEEPMYND LKKKIALFCN VTPDAVIEAT
DMSTIYEVPL EMLREKLDVI CMKKLGIPIE KEPDMTKWRA FLDKLKYPKS KVTIGLIGKY
VELQDAYKSI LESFIHAGAM NECKVVVQNI HSEFLTQENV AEKLRNLDGL LVAPGFGHRG
IEGKIVAIQY ARENSLPFFG ICLGMQMAVV EYARNVIGWT DAHSTEMNPD TPHAVIGLME
EQKKITVKGG TMRLGAYTCE LIPGSKAATI YNNTTISERH RHRYEFNSQF LADFEKAGMV
PSGRNPESGL VEMVELPEHP FFVGCQFHPE LKSTVEAPAP LFVHFIAAAK QYAEDKTIKA
KVAEEKIAHQ