| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6474 |
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| Symbol | |
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| ID | 8362658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8133145 |
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| End bp | 8134548 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968602 |
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| Product | coagulation factor 5/8 type domain protein |
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| Protein accession | YP_003126079 |
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| Protein GI | 256425426 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.904376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.80795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATG TATTCTTTTT GCGTCTTGCG CTGTGCATGC TGTTGGCGAT GCCGGCCATG
TTAAAGGCGC AGGTGAAATC AACCGCAAAA CAACTGGCAA CATTACAACA GGAATTTGTC
GATTTGCGTT TCGGTATGTT TATTCACTTT AACATCCCAA CATTCGCTGA TCAGGACTGG
CCTGATCCGG AAGCGCCGGT ATCCCTGTTT AATCCTAAAA AACTGGATTG TAACCAATGG
GCAGCCACCG CGAAAGCAGC TAATATGAGC TATGGCTGTC TGACCACCAA ACATCATAGC
GGCTTCTGTA TCTGGGATAC CAAGACGACA GATTATAATG TGATGAACAG CCCTTACAAG
AAAGATGTGG TAAGGGAATA TGTAAACGCA TTCAGGGCCA AAGGACTGAA AGTTATGCTG
TATTACTCTA TCCTGGATAC CCACCACAAA CTGCGTCCGC ATGACATTAC CCGTCAGCAC
ATCGATATGG TGAAAGCACA GCTGACCGAA CTCCTGACCA ACTACGGCGA GATCAGTGCA
CTCATTATCG ATGGATGGGA TGCTCCATGG TCCAGGATCT CTTATGATGA AGTACCATTT
GAAGAGGTTT ATCGCCTTAT TAAGACCCTG CAACCTAATT GCCTGGTAAT GGACCTCAAC
GCGGCAAAAT ACCCGACAGA GGCCCTGTTT TACACCGATA TCAAGTCTTA TGAGCAGGGT
GCTGGTCAGC ACATCTCTAA AGAAGCAAAC AGACTGCCGG CATTATCCTG CCTGCCAATC
AACAGCGCAT GGTTCTGGAA ATCTGATTTC CCGACGACTC CTGTAAAAGA TCCGGCAAAA
CTGGTAGACG ACATCCTGGT ACCGCTGAAT AAAGCATGGT GTAACTTCAT CCTGAACGTT
GCGCCAAACC GCGACGGTCT GATCGATCCT AACGCTGTTA AAGCACTGGA AGAAGTAGGA
AAGCGCTGGA AAAACACAGG TGCTATGCCT GCCTTGACAC CAGCAGAAGC ACCGATCATC
TCTTCTAATA TTGCTAAATT CCAGCGCAGC AACTCCAGCT GGAGCAATGA TATGAATATC
ATGGATTTTG CGAATGACGA CCGTTTCGGT AGCAGCTGGC AGTCCAACCC GGTTGTAAAA
CAACCATGGT ATGAAATCAT CTTTGATAAA GATAAAAGCT TCAATATGAT CACCATCGTT
GAAGACGGCA GCAATATCAA AAAATACCGC CTGGAATACA ACGAAAACGG TGTATGGAAA
CCAATTACAC AAGGTGAAGG TGGCGGTCGT GTGAAGATCC ATCGCTTTAA CAGAGTATGG
GGTGGTAAAG TGCGTATACT GATCGATGAA TTCAAAGATG CTCCTGCTAT TGCAGAATTC
GGTATCTTTG ATGAAAGAAG ATAA
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| Protein sequence | MKNVFFLRLA LCMLLAMPAM LKAQVKSTAK QLATLQQEFV DLRFGMFIHF NIPTFADQDW
PDPEAPVSLF NPKKLDCNQW AATAKAANMS YGCLTTKHHS GFCIWDTKTT DYNVMNSPYK
KDVVREYVNA FRAKGLKVML YYSILDTHHK LRPHDITRQH IDMVKAQLTE LLTNYGEISA
LIIDGWDAPW SRISYDEVPF EEVYRLIKTL QPNCLVMDLN AAKYPTEALF YTDIKSYEQG
AGQHISKEAN RLPALSCLPI NSAWFWKSDF PTTPVKDPAK LVDDILVPLN KAWCNFILNV
APNRDGLIDP NAVKALEEVG KRWKNTGAMP ALTPAEAPII SSNIAKFQRS NSSWSNDMNI
MDFANDDRFG SSWQSNPVVK QPWYEIIFDK DKSFNMITIV EDGSNIKKYR LEYNENGVWK
PITQGEGGGR VKIHRFNRVW GGKVRILIDE FKDAPAIAEF GIFDERR
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