Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6451 |
Symbol | |
ID | 8362635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8107020 |
End bp | 8109008 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968579 |
Product | DNA primase |
Protein accession | YP_003126056 |
Protein GI | 256425403 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.6099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTTCAC AGAATACCAT ACAACAGATA CTCAGCCGGA TTGACATTGT GGAGATAGTA GGCAATTTCG TGAAACTGAA AAAGCGCGGC GCCAACTATC TGGGACTTTG TCCGTTCCAT AATGAGAAGA GCCCTTCCTT CACTGTTACT CCCAGCAAGG AGATATTCAA GTGTTTTGGT TGCGGACAGA GCGGGAATGC CATTAAGTTC ATCATGGAGC ATGAGAAGTA TTCTTATGTG GAAGCACTGC GCTGGCTGGC GCAGAAATAT GATGTTCCGA TTGAAGAAAC AGAGGTAAGT CCGGAAGTCA GACAGCAGCA GCTGATGGCT GACAGCCTCT ACATCATCAA TAATTTCGCA CGCGAATACT TTTCCAATAC CCTTTTCAAT ACAGAAGAAG GTCAGAATGT CGGGCTAAGT TACTTTGAGG AACGCGGTTT TACACAGGAG ACCATCCGCA AGTTTCAGCT GGGTTACAGT CTGAACACCT GGGATGCTTT TACTAAAACC GCCCTTGCCA AAGGTTATAA TCTTGATTAC CTTCAGAAAA CAGGGCTGGT CACCGTCAGG AATGAGCAAC CCGGCGATAA CTACCGTGGT CGTGTGATCT TCCCCATCCA TAACCAGAGC GGAAAGGTAT TGGGATTTGG CGCCCGTATC CTGGTTAAAA ACGACCGTGC GCCGAAGTAT GTCAACTCAC CAGAGAACGA GATCTACGTT AAAAACCGGG TACTGTATGG TACTTACTTT GCCCGGCACG CGATTGATAA ACTGAATGAG TGTCTGCTCG TAGAAGGTTA TACGGACGTC GTCTCCCTGC ATCAGGCGGG TATTGAGAAC GTGGTGGCGT CCAGCGGCAC CTCCCTTACG CAGCACCAGC TCAGGCTCAT TAAGAAATAT ACCAACAACC TCACCATCCT TTTTGACGGG GACAATGCGG GCGTAAAAGC GGCATTGAGA GGCCTGGATA TGGCCATCGA GGAAGGCCTG AACGTAAAAC TCGTTTTAAT CCCCGATAAG GAGGATCCGG ACAGTTACGT ACAGAAGATA GGTGCAGACG CTTTTCGTGA GTTTATTGCC AATAATAAGC AGGATTTCGT ACTGTTCAAG CTACAGATCT CCATGCAGGA GGCAGGCAAT GACAGTAGCC GTAAATCACA GCTGGTAAAT GAGATCGCGG AGACCATTTC CAAGATCGAT AAAACGGAGG ACTTCACCAG GCAACAGGAT TACATCCGTC AGTGTAGTCA GTTGCTGAAG ATCGACGAAC AGGGGCTTAT TAACCTGGTC AATAAATTCA TCCGCGAGCG TTTCCAGAAG AAAGAGCAGC AATTCAACCG GGAGAACAAT AATAATAACA ATGCTGCTCC TGCCATGGAC GACGATCTGT CTCCGGAGGC CATTGCCGCT ATGGAGGCGA TGGAAAATGG CGGGGAACCG GCAGTTAACT TCTTCAATCC GGATGAAAAG CAGGAAAGAG AATTAGTGAA GATACTCCTG CGTTTTGGCG ACAAACCTTT CAGTGAGGAA GATCAGAGTA CGGTGGCAGA TTACATTTTC CACCTTCCCT ATGATTTTGA ATCACTGGCG GATAATGAAA TGGTGAAACG TATACTGCGG GAATACAAAG TGATGTATGA CCAGGATAGT CTGCCGGATA AAAAATGGTT CCTCTATCAC AATGATCAGG AAGTGGCAAC GCTGGTAGTG GCTATTATGG AAGATAAGGA AGCTGAGCTT AGCACTGCCT GGAAAGATAA GTTTGAGATT GATACCGTGT ATGGTGATAA TGCTTATCTG AAAGATACTA TCTCTACTAC GAATTACCTG ATTTTAAGAA AGATCCGGAA GATGATCATG GAGAATCAGC AGGAGATGGA GCGATCTACT GTATTTGAAG ACCAGATCAA ATGTATCGAG ATGCACAAGC ACCTGAAAGT ACTGGAAAAC GAACTGACAC AGGGACTGGG AACGGTTATT TTCAGATAA
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Protein sequence | MISQNTIQQI LSRIDIVEIV GNFVKLKKRG ANYLGLCPFH NEKSPSFTVT PSKEIFKCFG CGQSGNAIKF IMEHEKYSYV EALRWLAQKY DVPIEETEVS PEVRQQQLMA DSLYIINNFA REYFSNTLFN TEEGQNVGLS YFEERGFTQE TIRKFQLGYS LNTWDAFTKT ALAKGYNLDY LQKTGLVTVR NEQPGDNYRG RVIFPIHNQS GKVLGFGARI LVKNDRAPKY VNSPENEIYV KNRVLYGTYF ARHAIDKLNE CLLVEGYTDV VSLHQAGIEN VVASSGTSLT QHQLRLIKKY TNNLTILFDG DNAGVKAALR GLDMAIEEGL NVKLVLIPDK EDPDSYVQKI GADAFREFIA NNKQDFVLFK LQISMQEAGN DSSRKSQLVN EIAETISKID KTEDFTRQQD YIRQCSQLLK IDEQGLINLV NKFIRERFQK KEQQFNRENN NNNNAAPAMD DDLSPEAIAA MEAMENGGEP AVNFFNPDEK QERELVKILL RFGDKPFSEE DQSTVADYIF HLPYDFESLA DNEMVKRILR EYKVMYDQDS LPDKKWFLYH NDQEVATLVV AIMEDKEAEL STAWKDKFEI DTVYGDNAYL KDTISTTNYL ILRKIRKMIM ENQQEMERST VFEDQIKCIE MHKHLKVLEN ELTQGLGTVI FR
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