Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6279 |
Symbol | |
ID | 8362461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7913688 |
End bp | 7915013 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968406 |
Product | hypothetical protein |
Protein accession | YP_003125885 |
Protein GI | 256425232 |
COG category | [S] Function unknown |
COG ID | [COG5368] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCAT GTGGAGGTTC CTCCTCCCAC CAGTCTACAA AAGACAGCAC GGCCACAGAT ACCCTGGCTT TATCAGCAGA TTCCATTTTT AATATCGTGG AAGAACAAAC CTTCCAGTAT TTCTGGGATG GTGCAGAACC CGTTAGTGGT ATGGCAAGGG AACGTTATCA TGTAGACGGT AATTATCCGG AGAATGACAT GAATGTAGTG ACCTCCGGTG GTAGTGGTTT TGGTGTGATG GCTTTACTCG TGGGTATTGA AAGAGGATAT ATCAGCAGAG AACAGGGGCT GGAACGGTTG ATGAAGATCG TTTCGTTCCT GGAGAAGGCG GACAGATTTC ACGGCGCATG GCCACACTGG TTGTATGGAG AGACAGGAAA AGTGAAGCCA TTCGGACAAA AAGACAATGG CGGAGATCTC GTAGAGACCT CTTTTATGAT ACAAGGGCTG CTTTGCGTCA GACAATATTT TGCCAATGGC AACGAACAGG AAAAAGCGCT GGCTGCCAGG ATTGATCAGT TATGGAAAGC GGTAGAGTTT AGCTGGTATA GAAACGGCAA AAATGTGCTC TACTGGCACT GGTCGCCTAA TTATAAATGG CAGATGAACT TCCCCGTGAC CGGTTATAAT GAATGCCTGA TCATGTATAT ATTGGCAGCG GCCTCTCCTA CACATGGTAT TCCTGCAGAG GTATATCATG AAGGATGGGC GAAAAGCGGC GCTATAAAGG ATAGTATCAA CGCCTATGGA CATACGTTGA AATTATCGCA CAACTTTGCG AAAGAATACG GCGGACCTTT ATTCTGGTCC CACTATTCTT ACCTCGGACT GGATCCCCAT GGACTAAAAG ACCGCTATGC GGATTACTGG GAAAATAATC TCAACCATGT ACTGATCAAC AGAGAATGGT GTATACAGAA TCCGAAGCAT TATAAGGGCT ACGGTCCCGA CAGCTGGGGA TTAACTGCCA GCTATTCTGT AAAAGGATAT GCAGCACATG CACCCGGCGA AAACAATGAC CTGGGTGTCA TATCTCCCAC GGCGGCACTG TCTTCAATGC CTTATACACC GGAGTATTCC AAACAGGCCA TGGTACACTG GTACAATGAT ATGCGGACGA AAATCTTTGG AAAATATGGC TTTTACGATG CCTTCAGTGA AACAGAGAAC TGGTATCCAC AGCAGTACCT GGCAATAGAT CAGGGACCTA TCGTTGTGAT GATGGAGAAC TATCGTAGCG GTCTGCTATG GAAACTATTC ATGAGTTGTC CTGAAGTACA GGCCGGCCTG AAGAAACTTG ATTTCCAGAG CCCTTACCTG AAGTGA
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Protein sequence | MMSCGGSSSH QSTKDSTATD TLALSADSIF NIVEEQTFQY FWDGAEPVSG MARERYHVDG NYPENDMNVV TSGGSGFGVM ALLVGIERGY ISREQGLERL MKIVSFLEKA DRFHGAWPHW LYGETGKVKP FGQKDNGGDL VETSFMIQGL LCVRQYFANG NEQEKALAAR IDQLWKAVEF SWYRNGKNVL YWHWSPNYKW QMNFPVTGYN ECLIMYILAA ASPTHGIPAE VYHEGWAKSG AIKDSINAYG HTLKLSHNFA KEYGGPLFWS HYSYLGLDPH GLKDRYADYW ENNLNHVLIN REWCIQNPKH YKGYGPDSWG LTASYSVKGY AAHAPGENND LGVISPTAAL SSMPYTPEYS KQAMVHWYND MRTKIFGKYG FYDAFSETEN WYPQQYLAID QGPIVVMMEN YRSGLLWKLF MSCPEVQAGL KKLDFQSPYL K
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