| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5579 |
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| Symbol | |
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| ID | 8361756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7126268 |
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| End bp | 7128706 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967723 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003125207 |
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| Protein GI | 256424554 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.761851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTCG GCAGAGCGGT GTATACATTT TTTCTTTGCA AAAAATTCTA CCACCTAGTG
AAACATATAT ACCTGATTCT GATCTTAGCT TTATGTCATC TCGCTGCCTT TGCACAAAAT
GGCAATATTA AAGGAAAAAT AACTTCTGCA GATGGCCATC CGGCCGCATT TGTCACCGTC
GGACTGAAAG ACACTAAAAA AGGTGCTGTT ACCAGCGAAG ACGGAGCGTT TATACTGAAG
AACGTCCGAC AGGGTGAACA TGTACTGATC ATCTCCTGCA CAGGTATGAA AACAGTACAG
CAACCTGTAA GTGTGACCGC CGACCAGACC ACCGATATTT CCCTGGCACT GGAAGCGACT
TCCGCCCAGC TGAATGAAAT CGTAATAGAA GGCAGCAGAA CACGTACGAT CAACAAACGT
CCTGTTACTG TAAGCAAGTT GCCGGTAGCG GCGATCGATC TGCCACAGGG TGTTGCGGTG
ATTGGTCATG AAGTGCTGGA AGATCAGCAG GTACAGCGTA TGAGTGATGT GGTGAAAAGT
GTGAACGGTG TTTATATGGC TTCCAGCAGG GCAGGTACCC AGGAGTCTTT TAATGCAAGA
GGTTATGGAT TCTCCAGCAC CAATATGTTT AAAAACGGCG CTCGTGTGAA TTCCGGTGTA
ATGCCGGAAA TGAGTTCCCT GGAAAGAGTA GAGATCCTGA AAGGCAGTGC GGCCATCCTG
TATGGTAACG TTGCACCAGG TGCGGTGATG AACATGGTGA CCAAACAGCC AAAGTTTAAC
TTTGGTGGTG AAGTAAACGT TCGTGCCGGT AGCTACGGAC TGTTCAAACC CGCTTTTGAT
GTATATGGTC CGCTGTCCTC TAAAATAGCT TACCGTGTTA ACGGCACTTT TGAAACGACT
GACAGCTATC GTGATAAAGT ACATTCTAAA CGTTATTATG TTAATCCGTC TTTACTCTTC
AAATTAAGCG AACGTACAAC ACTGATCGTA CAGGGCGATT ACCTGAAACA TGATTTCACT
CCTGATTTTG GTATCGGTTC ACTGGATAAT ACAAAGATCG CTGATGTACC ACGTAACAGC
TTCTATGGTA CGTCATGGCA ATATGCGCAT ACTCAGCAAT CATCTGCCGG CGCTTCTATC
AAGCATCAGC TGAACGACAA CTGGACCCTC AATGGTATGT TTACTTACCA GCGTTATAGC
AGGGACTATT ATGCCATTGA AAGAATTCAG GCAGATGCAA ATGGTAAATG GGCTCGTCCG
CTGAACAGGG CATATAACTC CGAAGATTAT TATATCGCAC AGCTGGACCT GACCGGTAAA
TTCAAAACTG GAAGTCTGCA GCACAATGTA CTCGCAGGCG TTGACGGCGA CCGCTATTAT
ACAAAAGCAT TTTCTTACAA TCAGCCAACT ACTTACGATA CGATCAATAT CCTGAACCCG
GACCTGTACA CACCACGTAC AGACATGCCG GATGCTTCCA GGATCAAGCG TGTTACTACC
CCGATCAACC GTCTGGGTGT ATATGTACAG GACCTGATCA AAATCAACAG TAAACTGAAC
TTCCTGGCAG GCGTACGTTT CTCTTATCTG CAGAATGAAG CGCCTGTCAC CCTTGATCTT
AAAACCAATG GGTCGACACA GACCAAGGCA AAATATGATC ATTCATTCTC CCCGCGTTTC
GGACTGGTAT ATAAACCGAT CGAAAGCACC GCGGTATTTG TCAGCTACGC TAACTCCTTT
ACACCTAACA ACGGTTTAGA TGTTGACAGC AATGCGCTGA AACCATCTGT GATCGATCAG
TATGAGGTGG GTATTAAAAA CGACTTCCTG AAAGGTAAAC TGTCTGTAAA TGTGACTGCT
TACCAGATCA GAAATAATAA CTACGCACAG ACGTCTCCTT TCCAGAAAGA TGGTGTGACG
CCAAACAATA ACGCTAACCT GAAAGCGCTG ATCGGTAAAA CCCTCAGCCG TGGTGTGGAA
GTGGATATCG CAGGCCATCC GATGGCGGGT CTGGATGTGA TCGCAGGTTA TAGCTACAAC
AATATCACTA TCGAAAGCAC CAGTGGTGTT GTAGGTGGTG CGGTGGAAGG CGAGCGCCTG
GTAGGTAATC CGAATCATAC TGCGAATGCC AGCGTGTTCT ATACCTTGCA GCAGTCAGCA
TTGAAAGGTG TGAAATTTGG TGTAGGTTAT TACTATATCG GACAACGTTT CGCGGGTTGG
AACAATACTA TCAATCAGTC GCAGAAATAT AACCGTCTGA TCTCCGTACC AGGATTCTCT
ACACTGGATC TGAGTGCCGG TTATTCTTTC AAACGTTTCG GTGTGATGGC AAAAGTATCC
AACATCACGA ATACTTATAA CTACTACGTA CACGAGAACT ACAGCATTAA TCCGATACCA
CCGACCCAGT TTGTCGGTAC GGTATCTTAT AAATTTTAA
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| Protein sequence | MRLGRAVYTF FLCKKFYHLV KHIYLILILA LCHLAAFAQN GNIKGKITSA DGHPAAFVTV
GLKDTKKGAV TSEDGAFILK NVRQGEHVLI ISCTGMKTVQ QPVSVTADQT TDISLALEAT
SAQLNEIVIE GSRTRTINKR PVTVSKLPVA AIDLPQGVAV IGHEVLEDQQ VQRMSDVVKS
VNGVYMASSR AGTQESFNAR GYGFSSTNMF KNGARVNSGV MPEMSSLERV EILKGSAAIL
YGNVAPGAVM NMVTKQPKFN FGGEVNVRAG SYGLFKPAFD VYGPLSSKIA YRVNGTFETT
DSYRDKVHSK RYYVNPSLLF KLSERTTLIV QGDYLKHDFT PDFGIGSLDN TKIADVPRNS
FYGTSWQYAH TQQSSAGASI KHQLNDNWTL NGMFTYQRYS RDYYAIERIQ ADANGKWARP
LNRAYNSEDY YIAQLDLTGK FKTGSLQHNV LAGVDGDRYY TKAFSYNQPT TYDTINILNP
DLYTPRTDMP DASRIKRVTT PINRLGVYVQ DLIKINSKLN FLAGVRFSYL QNEAPVTLDL
KTNGSTQTKA KYDHSFSPRF GLVYKPIEST AVFVSYANSF TPNNGLDVDS NALKPSVIDQ
YEVGIKNDFL KGKLSVNVTA YQIRNNNYAQ TSPFQKDGVT PNNNANLKAL IGKTLSRGVE
VDIAGHPMAG LDVIAGYSYN NITIESTSGV VGGAVEGERL VGNPNHTANA SVFYTLQQSA
LKGVKFGVGY YYIGQRFAGW NNTINQSQKY NRLISVPGFS TLDLSAGYSF KRFGVMAKVS
NITNTYNYYV HENYSINPIP PTQFVGTVSY KF
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