| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5578 |
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| Symbol | |
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| ID | 8361755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7124805 |
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| End bp | 7126160 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967722 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003125206 |
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| Protein GI | 256424553 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.46516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGT ATCATCATTT AAAAGGATAT ATATTTACTG GTACGCTTGC ACTCTATCTA
TTGAGTGCAG GCGGCAGCCA GCTGAAAGCA CAGGATATCA GTCTGGACAG CGTTATCAGC
AAAGCGCAAA AGAACAATAA CAGTCTGAAA GCCGATGCGC TCAATATTGA CCGTGCACAG
TCGCAAACCA TCATTTCCAG AAGTTATCTC AGGCCCGAAG TAGGTTTCTC TTCCGCTGTG
AATCATTATT TCCAGCAACC CCTCTTCTTT GGTTTTGGCG ACGCCGGTAC AACTCCTGCT
GATAAGATCG GATACGGCCG CTTTGGTGGT AAAGACCAGG CAAATGCATC CCTGGATATC
AGCGTACCGA TATATAGTCC GCTGCAGCGA TCTACCATCG AAAAGAACAA ACTGGAAGAA
ACACAGCGTC GCCTGCAATA CCGTATGAAA GCGGCAGACG TTACAGCTGC TGTCAAACAG
GTATATCTGC GCATACTCGT ATTGGAAAAA AGGAAACAGT TACAACAGGA AAGTATCGAA
CGAAACAAAC GTGCACTCGC GGATGCCAGA TCCCTCTTCT TACAGGGGAA GGCTTTACTG
GTAGACACAC TCCGGGCCTA TACCTCCTGG AAGAACCTGG AACCGGATCT CTTACGGATC
AGTTACGCGA TCGACGTCAG CAAGGAACAA CTCAATATCC TGATGGGAGC AGATCCCGCT
GCACACATCA GTCTTGCTGA CACATTGCAG GCCCCTGAAA ATGATACGCT GCCGGACGAA
CCTGCGCTGT TTGCCCGTTC CCTACAGGAA AGACCCGAAC TGCAGTTACT TTCATTACAG
CGGGATATCA GTCAAAAGGA AGTAGCCACC GCAAAGAATG CCAGACTACC TGTTATCACA
GGTGTAGGAC AATACCTCTT GCAGACACAG GCCAACAGTT TTAAATACTA TGACGCCTAC
TATCCTTCCA CTTCTTTTGT GGGCGCAAAA ATCACCCTGC CAATCTATAC AGGTGGCAGA
CATAATGAAC GTATCAAAAA AGCACAGATA GAACAACAGC AGGCCAGTAT TCAATACACT
GATGCAACAG ACAAACTACA AGGTCAGGTA AAACAGATTG TCGCCAATCT GAATGAGACT
TATCAGCGTA TACAAACACA GGCTACGGTG ACCAGTACCG CTGAAAGCAG TTACCGGCTG
ACGAAATACC GTTACGAAAG AGGAGCCGCT ACAAGGCTTG AGCTGGTAGA TGCGGAACTG
TCATTGACAA GCGCGAGATC AGCGTACCTG GAAGCGGTAT TTGATTTTGA GGCTGCGAAG
ATAGAGATGG AGCGACTACT GGGCACAACA CACTGA
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| Protein sequence | MKQYHHLKGY IFTGTLALYL LSAGGSQLKA QDISLDSVIS KAQKNNNSLK ADALNIDRAQ
SQTIISRSYL RPEVGFSSAV NHYFQQPLFF GFGDAGTTPA DKIGYGRFGG KDQANASLDI
SVPIYSPLQR STIEKNKLEE TQRRLQYRMK AADVTAAVKQ VYLRILVLEK RKQLQQESIE
RNKRALADAR SLFLQGKALL VDTLRAYTSW KNLEPDLLRI SYAIDVSKEQ LNILMGADPA
AHISLADTLQ APENDTLPDE PALFARSLQE RPELQLLSLQ RDISQKEVAT AKNARLPVIT
GVGQYLLQTQ ANSFKYYDAY YPSTSFVGAK ITLPIYTGGR HNERIKKAQI EQQQASIQYT
DATDKLQGQV KQIVANLNET YQRIQTQATV TSTAESSYRL TKYRYERGAA TRLELVDAEL
SLTSARSAYL EAVFDFEAAK IEMERLLGTT H
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