Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4788 |
Symbol | |
ID | 8360964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5960672 |
End bp | 5961016 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644966938 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003124423 |
Protein GI | 256423770 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000200631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.763075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGA TTACTTTCGG CAAAAGGCTT ACTGAGGTGA GGAAAGACAA AAAACTATCT CAGGACGAGA TAGCTAAAAA GGTAGGCGTA CATGGGGCTG TCATTGGCAG GTATGAACGG GATGAAGTAA AACCCTCTAT TGAGATGGCC GCCAATATCG CTGCCGCGCT GGAAGTCTCA TTAGACTATC TCGTTGGTAA CACTGATCTA CTTCTGGACC AGACTATCCT CGACAGGATT ATGGATATTC AAAAACTAAG TGACCAGGAT AAAGCAGATG CCTTTAAACT ACTGGATATG TTCCTTCGTG ACGCAAAGGC CAGACATGCT TATCATAAAC AATAA
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Protein sequence | MKQITFGKRL TEVRKDKKLS QDEIAKKVGV HGAVIGRYER DEVKPSIEMA ANIAAALEVS LDYLVGNTDL LLDQTILDRI MDIQKLSDQD KADAFKLLDM FLRDAKARHA YHKQ
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