| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2737 |
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| Symbol | |
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| ID | 8358898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3350812 |
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| End bp | 3353016 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964917 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003122417 |
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| Protein GI | 256421764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000503167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA ACATGCTGAA AGCCTGCCCG CTGCTCATTA CCTTATTTGT ATTTTGTCAG
GATCTCCTGG CGCAATCCCG GCCTACCTGG ATATGGTACC CCGGTGATTT CGAAATCTGG
TTAAGTAATA ACATGCAGAA CCGTCGTACA GAGAGGAATA CTTTTTATCC TGTATTCTGG
AAATATGACA GCCATTATCC ACTGATAGAT TTTCACAAAG ACTTTGATCT GACGACTGCC
GAAGCAGTAA AGATCTACAC AGAAGGCGCT TATAACGTTA AAATAGATGG TCGTGCAATA
GAAGGCGTAC CACAACAGAT AACAGTACCA GCCGGTCATC ACCGCATCAA TATCAAAGTG
TTTAATCAGG CAAACGTACC TGCTGTCTAT GTGGAAGGAA AAACGATCGT GTCCGACAGC
AGCTGGCTGG TAACCTTTGA AGATAAGGAA TGGATTGACG AAACAGGTAA AGCCTCTGAC
GTGTCTGCGA CAAAATGGTT GAATGCAGGT AGCTGGAATT TTCATCATTC GCAGACGTTA
CCATCCGCCT GTAAACTACC TGTACGGCCA CAATATGCCG TCAGTACCAA TAAAAGTAAC
AGTGGTACAC TCGTTGATTT CGGGAAAGAG ACCTTCGGCT TTATCCGCCT GCATGGCGTG
CAGGGTACCG GTAACGTAAC CTTATATTAT GGCGAAAGCA AAGAGGAAGC ATTGCATGCA
AAGTCAGCCG AGACATACGA CGTCTTTTCT TCCAGGCAAT CCTCTAAAAC AGATTCCCTG
CTACCATCTT CCAAAGCCTT CCGTTATGTT AATATCGTTA CCAGCGGAGA TGTCAAAGTA
GATAGTATCT CTATGTTATA TGAATATGCA GGTCTGAAGG AGAGGGGACA GTTCCGTTGC
TCAGACGAAG AGGTCAACCG TATCTATGAT ATCTCAAAAT ATACCTTCGA ACTCAATACC
CGTGAATTCT TCATTGACGG GATCAAACGT GACAGATGGG TATGGAGTGG TGATGCGTAT
CAGAGTTACC TGATGAACTA TTACCTGTAT TTTGATAATG CCACTGTATC CAGAACCATC
CTCGCCTTGA GAGGGAAAGA CCCGGTGACC AGCCATATCA ATACCATCAT GGACTATACC
TTTTATTGGT TCCTCAGCAT TTATGACTAC TACCTCTACA CCGGTGACCA GTCGTTTATT
AAACAGTTCT ACCCACGTAT GCAGACCATG ATGGAATACT GTCTTGGCAG AAGAAATAAA
GAAGGACTGA TGCAGGGCTT ATCCGGTGAT TGGGTATTCA TAGACTGGGC CGACGGATTA
AGTAAGAAAG GCGCTGTCAG CTTTGAGCAA TTGTTGCTAT GTCGTAGTCT GGAAACCATG
GGCCTTTGTG CCGATCTTGT CGGTGATAAA TCTGATGCAG CAAAGTACAA TCAATATGCC
GCCACACTGA AGAAACAACT CTTTGAGCTC TATTGGAATC AACAGCAGCA AGCTTTGGTA
CACAGCAGGG TCGATGGTCA GCAGACAGCC AATGTTACCC GTTACGCTAA TATGTTTGCC
ATTTTTTACG ACTACTTCAA CGCAGCACAA AAGAATGCCG TAAAACAATC TGTTTTACTG
AACGACAGTA TACAAAAGAT CACTACCCCT TATATGCGTT TCTATGAACT GGAAGCATTA
TGTGCCATGG GAGAACAGGA CTACGTACTA AAAGAAATGA AGGACTATTG GGGCGGTATG
CTCAAACTGG GGGCCACCAG TTTCTGGGAA GTCTACAATC CTGCGGAAAC AGGCGTACAG
CACTATGCGA TGTACGGTCG TGCATTTGGC AGAAGCCTCT GTCATGCATG GGGAGCGAGT
CCGCTTTACC TGTTAGGAAA ATACTATCTG GGCGTAAAAC CTACTTCCGC CGGATACAAT
ACCTACACCG TACAACCTGC ATTAGGTGGT TTACAATGGA TGGAAGGAAA GGTGCCGACA
CCCAATGGTG ATATCGTGCT CTATTGCAGT ACGAAGGAAA TGAAGATCAC GACTGCTGCC
GGTACCGGCT TGTTGCGTTT TCGCAGTAAA ATAAAGCCAG TATGCAAAAC AGGTACGTTG
GTAAACAAAG GAGAAGACTG GTATGAGATG GCCATGCGGG CAGCCACCAG TTACGTAGTG
AATTATCAGG CGCCAAAACC GGAAACACAT GCAAAAACCA GATAA
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| Protein sequence | MKNNMLKACP LLITLFVFCQ DLLAQSRPTW IWYPGDFEIW LSNNMQNRRT ERNTFYPVFW
KYDSHYPLID FHKDFDLTTA EAVKIYTEGA YNVKIDGRAI EGVPQQITVP AGHHRINIKV
FNQANVPAVY VEGKTIVSDS SWLVTFEDKE WIDETGKASD VSATKWLNAG SWNFHHSQTL
PSACKLPVRP QYAVSTNKSN SGTLVDFGKE TFGFIRLHGV QGTGNVTLYY GESKEEALHA
KSAETYDVFS SRQSSKTDSL LPSSKAFRYV NIVTSGDVKV DSISMLYEYA GLKERGQFRC
SDEEVNRIYD ISKYTFELNT REFFIDGIKR DRWVWSGDAY QSYLMNYYLY FDNATVSRTI
LALRGKDPVT SHINTIMDYT FYWFLSIYDY YLYTGDQSFI KQFYPRMQTM MEYCLGRRNK
EGLMQGLSGD WVFIDWADGL SKKGAVSFEQ LLLCRSLETM GLCADLVGDK SDAAKYNQYA
ATLKKQLFEL YWNQQQQALV HSRVDGQQTA NVTRYANMFA IFYDYFNAAQ KNAVKQSVLL
NDSIQKITTP YMRFYELEAL CAMGEQDYVL KEMKDYWGGM LKLGATSFWE VYNPAETGVQ
HYAMYGRAFG RSLCHAWGAS PLYLLGKYYL GVKPTSAGYN TYTVQPALGG LQWMEGKVPT
PNGDIVLYCS TKEMKITTAA GTGLLRFRSK IKPVCKTGTL VNKGEDWYEM AMRAATSYVV
NYQAPKPETH AKTR
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