| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2523 |
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| Symbol | |
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| ID | 8358682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3099507 |
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| End bp | 3100076 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644964706 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003122208 |
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| Protein GI | 256421555 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000113171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATAGAA CAACTGTCCT GAAACTGCTA TTTCCCCTGT TGCTGTCGTG CACCGAAGTA
CCGGAAAAAA AGACCGAATT GGAACAGTTG CCCGTTTACA CGGATGATTC ACTGATGAGT
CCTCCTGATA CAACTATTAC TGTTAGTACA TCCAGCATCA AGACAGGCAC AACGAATCCG
GATGAACTAT TAGCCTTTTC CAAAACATTG AAAGGTATTC CGTATAAATA TAGTTCCACA
GATCCCCGCA GAGGATTTGA CTGTTCAGGA TTTATAACCT ATGTGTTTAA TCACTTTAAA
ATAGATGTGC CAAGAACCTC GGCGGGTTTC ACCAATGAAG GGGAAACAGT CTCGCTTGCT
GAAGGAAAAC CCGGTGATCT TATTCTGTTT ACAGGCACCG ACAGCACCAT AAGGACCGTC
GGACATATGG GCATCATCAC ACAGGCAGAT GATAGCGTTG TATTTATACA TTCTACCTCC
GGTAAGGCGA ATGGGGTAAC TGAGACGACA TTGAACCCAT ATTATATGGG AAGATTTGTA
AAGGTAATCA GGGTTTTTCC CCATCACTAA
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| Protein sequence | MYRTTVLKLL FPLLLSCTEV PEKKTELEQL PVYTDDSLMS PPDTTITVST SSIKTGTTNP
DELLAFSKTL KGIPYKYSST DPRRGFDCSG FITYVFNHFK IDVPRTSAGF TNEGETVSLA
EGKPGDLILF TGTDSTIRTV GHMGIITQAD DSVVFIHSTS GKANGVTETT LNPYYMGRFV
KVIRVFPHH
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