Gene Cpin_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1948 
Symbol 
ID8358099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2375001 
End bp2376365 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content33% 
IMG OID644964136 
Productabortive phage resistance protein-like protein 
Protein accessionYP_003121645 
Protein GI256420992 
COG category[R] General function prediction only 
COG ID[COG1106] Predicted ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGA GATTTGTTGT TAAAAACCTT TTTTCCTTTA AAGAAGAGAC GGAGTTTAAC 
TTATTCCCTA ATAGAACTAC CAATCTACTC CATCATAAAA CTCTTTTGAA TGATATTGCT
GTACTTCGTT TTAGCGCAAT TTATGGGGCT AATGGCTCCG GTAAGTCTAA TTTAGTTAAA
GCAATCAGTT TACTGGATCA AATTATAGAA AATGGGAAAT TACCTACTAA TCCAAGACAT
CTAAAATTTA AACTATCAGA AGAGAATGAA CTTGAGCCTG TCTCTTTAGC AATAGAATTA
TTTGCAGGGG TGTCTATTTA TTATTACAGC ATTACGTTTG ATGGGCAAAA TATACTTCAT
GAATATCTGG CTAAAAGTAA ATCAACCGAG GATGAGCTAA TTTTCGAAAG AGAAATTATT
GAGGGAAAGC AAGAGATAAA ATTTTATCCG GAATATCTTT TAAATGAGAA GAACAAGCTT
TTTGCTGAAG TTTTAGCGGA GAAGTTAGTT CCATTAAATG AAGTACTAAT ATCATTTCTG
TCGACAAAAT ATGAAAAAGA ATTTCCTGAT ATTGCTCGTG TGGTTAATTG GTTTAGATAT
GATCTGATTG TAATTAGTCC AGATGCTAAG CCGGGTGAAA TTGCCGACAT CCTTGATATA
GATCAGGACA TGAAAACGTT TGCGAACGAG TTCTTACCAA GTTTAAATAC CGGAGTATCC
AATATCGAAG TTGTTCGGGA AAATTTCTTT GAAAAAGTGA ATATAGAAAC TCCAGAAATG
CATGAAACAT TAGCTCAGCT GATTGAAAGA ATGAAAGATT TGCCTGATGG AGTAATACCA
ATGCCTCATT TGTCACGCGA TGAATTGTCT TTTGTTAAAG AGGGTGAGAA GCTTGTAATA
AAGAAACTTG TTACTAATCA TAAAACAATT ACTGGAAAGA ATGTCCCCTT TAATGTTTCT
TTAGAATCTG ATGGTACCAG AAGATTGATA GATTATATAC CCGCATTTCA GGATATCATT
CATCAGGAAC GGGTATATAT CATTGATGAA ATAGAAAGAA GTATACATCC TTTGACAATA
AAGGAAATTA TCAGGAAAAT TTCTCATGAT CCTCAGGCAA AAGGACAAAT GATTTTTACC
ACTCATGAAT CTAATTTATT AGATCAGGAT ATTTTAAGAA CGGATGAAAT ATGGTTTGCA
CAAAAAGATT TAGGAGGCGC ATCCAAGCTA TATTCATTAA GTGATTATAA AGTACATAGC
ACTATCAATA TTGAAAACGG GTATTTGAAC GGACGTTATG GAGGTATTCC ATTTTTGTCT
AATCTACGAG ATCTTAATTG GAATAAAGAT GAGATATCTG AGTAG
 
Protein sequence
MILRFVVKNL FSFKEETEFN LFPNRTTNLL HHKTLLNDIA VLRFSAIYGA NGSGKSNLVK 
AISLLDQIIE NGKLPTNPRH LKFKLSEENE LEPVSLAIEL FAGVSIYYYS ITFDGQNILH
EYLAKSKSTE DELIFEREII EGKQEIKFYP EYLLNEKNKL FAEVLAEKLV PLNEVLISFL
STKYEKEFPD IARVVNWFRY DLIVISPDAK PGEIADILDI DQDMKTFANE FLPSLNTGVS
NIEVVRENFF EKVNIETPEM HETLAQLIER MKDLPDGVIP MPHLSRDELS FVKEGEKLVI
KKLVTNHKTI TGKNVPFNVS LESDGTRRLI DYIPAFQDII HQERVYIIDE IERSIHPLTI
KEIIRKISHD PQAKGQMIFT THESNLLDQD ILRTDEIWFA QKDLGGASKL YSLSDYKVHS
TINIENGYLN GRYGGIPFLS NLRDLNWNKD EISE