| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1762 |
|---|
| Symbol | |
|---|
| ID | 8357912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2136480 |
|---|
| End bp | 2137085 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963949 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003121459 |
|---|
| Protein GI | 256420806 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGA AGAAAAATGT TTTCAAAATA TACAACATCA TTGCGGACTG GTTTGCGGCC
AACCGTCCTC AGGAATTGAT GGAGAAAGCA TACCTGGATA AGTTGATTCA ACTCACAGGT
AAAGATGCTC ATATACTCGA TCTGGGCTGC GGGACGGGTA AACCGATGAT GCATTATCTG
ATCGGCCAGG GACTGCAAGT GACAGGTATT GATGGCAGTC ATCGTATACT GGAAATCGCC
AAACAAAACC TGCCATCCGC TGTATTTATA CAGGCTGACA TGCGGACGCT CCGGCTGAAC
AGGAAATTCC ACGCCATCAT TGCCTGGCAC AGCTTCTTTC ATCTGCCTGC AGAAGACCAA
CCAGCTATGT TCGAGGTCTT TAAGGACCAT TTACATGACA AAGGAATATT GATATTCACA
TCCGGCACAG AACATGGAGA AGCATGGGGT ATGAACGGCG GTGAAAACTT ATTCCATGCC
TCACTCAACC GTGATCAATA CCAGACCTTA TTGGAAGCGC ATCATTTCCA GGTAATCGCT
TATCAGGAAA ATGATCCGCA GTGTGGTAAT GCTACCGTGT GGATAGCGCA ACTCAGTCTT
CCCTGA
|
|---|
| Protein sequence | MEEKKNVFKI YNIIADWFAA NRPQELMEKA YLDKLIQLTG KDAHILDLGC GTGKPMMHYL
IGQGLQVTGI DGSHRILEIA KQNLPSAVFI QADMRTLRLN RKFHAIIAWH SFFHLPAEDQ
PAMFEVFKDH LHDKGILIFT SGTEHGEAWG MNGGENLFHA SLNRDQYQTL LEAHHFQVIA
YQENDPQCGN ATVWIAQLSL P
|
|---|
| |