Gene Cpin_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1235 
Symbol 
ID8357351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1482287 
End bp1482934 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID644963391 
Producthypothetical protein 
Protein accessionYP_003120934 
Protein GI256420281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTA TCTTATTTTC CATTTGTCTG TTAGTTGGTC TGGCTTCTGC CTCCATGGCG 
CAGAGCGCAC AATACGAAGG CGCAATGTCC AAACAGGTAG CCATGCTGGA TGATTCCACC
AATTTTACCC CTGACAGATT ACTTGAAATT GCCAATACAT TTGAGCGTAT CGGTGCTGCT
GAAAAATCAC AATGGCTGCC CTTCTATTAT GCAGGTTATT GCTATGTGAT GAGCACATTT
ATGCAGAAAG ACAATGATAA GGTAGACGAT CTGGCTGATA AGGCAGCGGT GAATATCGAA
CAGGCAGAGG CTATCAGTCC TAAGAACGAT GAGATCAACT GTATTAAATC ACTGATCGCT
ACTTCCCGTA TCCGTGTAGA CCCGATGAAC AGAGGTATGA AATACGGTAT GGAATCCGCC
AATCTGCTGG TACAGGCTAA TCAGATCAAT CAGGAGAATC CAAGAGTATA CATGCTGCAG
GGCCAGTCTT TATTCTATAC ACCAGAGCAG TTTGGTGGTA GCAAAACAGA AGCAAAGAAG
AAGTTTGAAG TAGCCTTACA GAAATTCAGT TCCTTCAAGC CAGCCAGCGG TATTGCACCA
CACTGGGGGG AAGCGTATAC GAAGGGGCTG CTTGCACAAA TCAAGTAG
 
Protein sequence
MKRILFSICL LVGLASASMA QSAQYEGAMS KQVAMLDDST NFTPDRLLEI ANTFERIGAA 
EKSQWLPFYY AGYCYVMSTF MQKDNDKVDD LADKAAVNIE QAEAISPKND EINCIKSLIA
TSRIRVDPMN RGMKYGMESA NLLVQANQIN QENPRVYMLQ GQSLFYTPEQ FGGSKTEAKK
KFEVALQKFS SFKPASGIAP HWGEAYTKGL LAQIK