| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0963 |
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| Symbol | |
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| ID | 8357077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1154712 |
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| End bp | 1156067 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963117 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003120662 |
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| Protein GI | 256420009 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0174638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.124893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAA AGACACTTTT CTGGATCCTG GGGATCATCA TTGTGCTGAT CGCTATTTTC
GCCTTGAGCA ATGCACGCAA GGATGACAGC ATTAAAGTGG CTGTCGATAA GGCAGAAGAT
AAAAATATCA TTGAGGTGGT ATCTGCCAGT GGCAAGATCT ACCCTGAAAC AGAAGTTAAG
GTGAGCTCCG ACGTATCAGG CGAAATCGTA GACCTTCCGG TACTGGAAGG CGATTCTGTT
AAAAAAGGAC AGGTGCTGGC GCGTATCTAT GCGGATGTCT ATGGCTCCGT AAGAGATAAG
GCGACAGCTT CCCTCAGCCA GGCACAGGCA CAACTGGCGA ATACTGCCGC TTCTCTCAAC
GCATTTAAAG CCAAACTGGA ACAAAGTAAA GCTGCTTACG ATCGTAACAA GGAACTGCTG
GCACAGAAAG TAGTGTCCCG TAGTGAATTT GAAACTGCCG AAGCGACTTA CCGTTCTGCC
CTGGCGGACT ACAATGCTGC CGCAGAACAG GTGAACAGTA ACCGTTACGC GGTGCAGAGC
GCCAAAGCTG GTGTGACGGA AGCCAATACC AACCTCCAGC GTACGACGAT CGTAGCGTCT
ATGGATGGTG TGGTATCCCT GTTGCCGGTA AAGAAAGGGG AGCGTGTGGT AGGTACCGGA
CAAATGAGTG GTACTGAGAT CATGCGTATT GCTGATCTGA ATATTATGGA AGTACAGGTG
GATGTTGGTG AAAACGATAT TCCCCGTGTA AAATATAATG ATACTGCTAT CGTAGAAGTG
GATGCCTACA GTGATCGTAA GTTCAAAGGC ATTGTAACGC AGATTGCCAG CTCCAGTAAA
GGTGCTGCTA CTGCGTCTGC TGCGACTACC TCTTCTGCAG AACAGGTGAC CAGCTACATC
GTACATATCC GTATCCTGGC CGAAAGTTAT GCTGATCTGA TTGATCCGGC ACATCCAAAG
AACTTCCCTT TCCGGCCGGG TATGAGCGCC AGTGTTGATA TCCAGACCCG CAGAAAGAAT
AATGTGCTGG CGGTGCCTAT TAATGCGGTA ACTACCCGTG ATGTGGTGGA TAGCTCAAAA
GCGGTAGGTG CGAAAAAAGA AGATCTGGCG GCAGCAAAAG AAAGCGGCAA GAATCAAAAA
GAGGTTGTTT TTGTATTGCA GGCGGATAAA ACCGTACGTC AGGTTATCGT AACAACCGGT
GTGCAGGATG ACGCGAATAT TGAGATCCTG AGCGGATTGA AACCGGGAGA GACGATTATC
AGCGCTCCTT ATTCTGCAGT ATCAAAAGAT CTTGAACAAG GAAAGAAAGT AAATGTGGTA
CCTAAGAAAG AACTATTCGA AGGAACCGGT AAATAG
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| Protein sequence | MKRKTLFWIL GIIIVLIAIF ALSNARKDDS IKVAVDKAED KNIIEVVSAS GKIYPETEVK
VSSDVSGEIV DLPVLEGDSV KKGQVLARIY ADVYGSVRDK ATASLSQAQA QLANTAASLN
AFKAKLEQSK AAYDRNKELL AQKVVSRSEF ETAEATYRSA LADYNAAAEQ VNSNRYAVQS
AKAGVTEANT NLQRTTIVAS MDGVVSLLPV KKGERVVGTG QMSGTEIMRI ADLNIMEVQV
DVGENDIPRV KYNDTAIVEV DAYSDRKFKG IVTQIASSSK GAATASAATT SSAEQVTSYI
VHIRILAESY ADLIDPAHPK NFPFRPGMSA SVDIQTRRKN NVLAVPINAV TTRDVVDSSK
AVGAKKEDLA AAKESGKNQK EVVFVLQADK TVRQVIVTTG VQDDANIEIL SGLKPGETII
SAPYSAVSKD LEQGKKVNVV PKKELFEGTG K
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