Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0877 |
Symbol | |
ID | 8356991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1050252 |
End bp | 1050950 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644963031 |
Product | phosphoribosyltransferase |
Protein accession | YP_003120576 |
Protein GI | 256419923 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATAA TGAAAAGCCT GTTATCCTCC CTCCTACACC TGTTCTATCC GCATACCTGT GATGGATGCG GAATAGAACT GACAAACACA GAGCACATTC TATGTCTCCG CTGTCACAAG CGACTGCCCT TTACGGGTTA TCAGTTACTG CAAGACAATC CTGTAGAAAA AATCTTCTGG GGACGGGTTA ATGTCCGTCA TGCTATGGCT ACCTGTTACT ACAGAAAAAA TGCCTTCCTC CAGCAACTGA TTTATCAGTT CAAATACAAG CAGCGGGAAG ATATCGCCAG CTACTTCGGA CGCCTCATGG GACACACACT CCGGCAAAGT TCCTGGCTAT ACGAAATAGA CGCCATCCTG CCTGTTCCCA TGCATCCTTC CAAAATACGG CAACGGGGTT ATAATCAGGC AATGGTACTG GCCAGCGGCG TAGCTGTGGC TACTGAAAAA ACACTGTCGG ACGGTATCCT AGTCCGTCAT CTGCAAACCG CTTCACAAAC CAACAAAGGA CGGCTCTCCC GCTGGCAGAA TGTATCGGAT AGTTTCTCGC TACAACTGAA CACTGATCTG AAAGGCAAAC ACCTGTTACT GATAGACGAT GTGATCACCA CCGGCGCCAC CTTGGAAGCC TGCAGCCGTT TACTGATCAG CGCCGGCGCT GCCGTAAGCA TCTGTGCACT GGCATTTGCC CGCCATTGA
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Protein sequence | MLIMKSLLSS LLHLFYPHTC DGCGIELTNT EHILCLRCHK RLPFTGYQLL QDNPVEKIFW GRVNVRHAMA TCYYRKNAFL QQLIYQFKYK QREDIASYFG RLMGHTLRQS SWLYEIDAIL PVPMHPSKIR QRGYNQAMVL ASGVAVATEK TLSDGILVRH LQTASQTNKG RLSRWQNVSD SFSLQLNTDL KGKHLLLIDD VITTGATLEA CSRLLISAGA AVSICALAFA RH
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