| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0661 |
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| Symbol | |
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| ID | 8356773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 803548 |
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| End bp | 804612 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962813 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003120360 |
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| Protein GI | 256419707 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.618567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGA TTGGAAATAT AACATTAGGC AATTTTCCGC TATTGCTTGC TCCTATGGAG
GATGTTAGTG ACCCGCCATT TCGTGCGGTG TGTAAAGAGA AGGGTGCGGA CCTGATGTAT
ACGGAGTTTA TCTCTTCGGA GGGACTTATA CGTGATGCCA TAAAAAGCCG GCGGAAGCTG
GACATCTTTG ATTACGAGCG CCCTGTGGGC ATTCAGATAT TCGGAGGAGA CGAAGAACCT
ATGGCCATGG CCGCCCAGAT TGTGGAGGCT ACTAACCCCG ACCTGCTGGA CATCAACTAC
GGTTGTCCGG TGAAAAAGGT GGTATGTAAA GGGGCCGGTT CCGGTATCCT GAAAGATATT
CCCAAAATGG TGAAACTGAC AGCCGCCGTA GTAAAGGCTA CCAAGCTGCC GGTAACAGTA
AAGACCCGCC TTGGCTGGGA CGACGACACT AAAAACATTG AAGAAGTTGC CGAACGTCTG
CAGGATGTAG GTATTCAGGC CCTGACTATT CACGGCCGTA CCCGTACTCA GATGTATAAA
GGCCATGCCG ACTGGACACT GATCGGAAAA GTGAAGAACA ATCCGCGTAT CCACATTCCT
ATATTCGGTA ACGGGGACAT ATGTACCCCG GAGCAGGCAA TCGCTGCCCG CGAAAAATAT
GGGGTTGATG GTGTGATGAT CGGACGTGCC GCGATCGGGT ATCCATGGAT CTTCAATGAA
ATAAAGCATT TTATGCAAAC GGGTGAACAT TTGCCGCCGC CATCTGTTCT TGAACGGGTG
GAAGTTTGTA AAAAACACCT GCAGCATTCT GTGCAATGGA AAGGTGACGT AGTGGGAATA
CTGGAGATGA GAAGGCACTA TACCAATTAC CTGAAGGGTT TACCTCATAT CAAAGAATTC
AGACAACAAT TAGTAACTTG CAGTACATTG GCAGCTGTAG AAGATGTGTT AGACGCGATA
GCATTGCATT ACAAAGATCA TATTATTGAA AGGACATCCC CCCTTACTGA CCAGAGCCTA
CTGCCAGCAA AGAATGAAGT AGCAGATTGT AACGTTTACG GATAA
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| Protein sequence | MVKIGNITLG NFPLLLAPME DVSDPPFRAV CKEKGADLMY TEFISSEGLI RDAIKSRRKL
DIFDYERPVG IQIFGGDEEP MAMAAQIVEA TNPDLLDINY GCPVKKVVCK GAGSGILKDI
PKMVKLTAAV VKATKLPVTV KTRLGWDDDT KNIEEVAERL QDVGIQALTI HGRTRTQMYK
GHADWTLIGK VKNNPRIHIP IFGNGDICTP EQAIAAREKY GVDGVMIGRA AIGYPWIFNE
IKHFMQTGEH LPPPSVLERV EVCKKHLQHS VQWKGDVVGI LEMRRHYTNY LKGLPHIKEF
RQQLVTCSTL AAVEDVLDAI ALHYKDHIIE RTSPLTDQSL LPAKNEVADC NVYG
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