| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0638 |
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| Symbol | |
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| ID | 8356749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 777935 |
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| End bp | 779068 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644962789 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003120337 |
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| Protein GI | 256419684 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCT CCGGAATATT CAGTACCCTG ATGCTGCTTG GCGCCCTGCA AGGCTTCATT
ATGAGCGGAC TGTTGTTCTT TTCCAAAAAA CGTCCGGCGA GAGACCGGCT GCTCGCTATA
TTGATCCTGC TCATCGCACT GGCCTGCCTG AACCTGCATA TTTTCGAGTC CAGCTGGATC
AATGAACTAC CCTTACTGCA ATTCCTGTTG AATTTTGTAC CACTCGTGGT GGTCATGCCG
TTAGGTCCAT TACTTTATTT CTATGTAAAA TCAAGTCTGG ACCCGGCCTT CCGGGTAAAC
ACAACACACA GACCTCATTT CTACTCAACT ATCATTGATA TCGTCCCCCA GCTGATCGCT
GTAACTTATG TCGGCGGCGT AATGGGTGGC ATATTGAAGA ATCATCCGCA GCCCTGGGGA
ATCGCGATCG ATACCTACAA TGTGTATGCA GATATCCCCC GATGGTTTTC TATGACCATC
TACGTCTATC TCTCCTACCG GTATATCTCA AGTGCACAGG TCAACAATGA AAAACACCTT
CGCTGGATAA GACAATTCCT GAAAGTCTTC CTGGTCTTTC AGCTGATCTG GTTTGTTTAC
CTGGTGCCTT ACGTCATCCC AAAGTATACA GACAAATTGC TGGATATGGT GGATTGGTAC
CCGGTATACA TTCCCCTGGT GATCCTGATC TATTATCTCG GGATCAAGGG ATATATGATG
ACGGCAGAAG AAGAAACAAC GGCTAAAAAA TCGGCTACCC CTCCCGCACC TATTCCGGAT
ACAGTTATCG GTGAAGCAGT GCCTTTGCTG ATGAAAGCCA TGGAACAGGA TCAACTGTAC
CTGAATCCGG AACTGAACCT TGCGCTGGTA GCACAACATA CCGGATTGCC TACTAAAACT
ATCTCCGCAG TGCTAAACCA GCACCTCCAA AAGAGCTTTA ATGAGTTTGT AAATGAATAC
CGGGTTGCCG CCTTTAAACA GAAAATTGCG GAATCCCGGC AGGAGCAATA TACCATCATG
AGCCTTGCCC TCGAATCAGG GTTTAACTCC CTCCCCACCT TTCAACGTGC CTTCCGGAAC
AATACCGGTA TGTCGCCCAG GGAATACATG AACAATCAGA ACAAAATGGC CTGA
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| Protein sequence | MSFSGIFSTL MLLGALQGFI MSGLLFFSKK RPARDRLLAI LILLIALACL NLHIFESSWI
NELPLLQFLL NFVPLVVVMP LGPLLYFYVK SSLDPAFRVN TTHRPHFYST IIDIVPQLIA
VTYVGGVMGG ILKNHPQPWG IAIDTYNVYA DIPRWFSMTI YVYLSYRYIS SAQVNNEKHL
RWIRQFLKVF LVFQLIWFVY LVPYVIPKYT DKLLDMVDWY PVYIPLVILI YYLGIKGYMM
TAEEETTAKK SATPPAPIPD TVIGEAVPLL MKAMEQDQLY LNPELNLALV AQHTGLPTKT
ISAVLNQHLQ KSFNEFVNEY RVAAFKQKIA ESRQEQYTIM SLALESGFNS LPTFQRAFRN
NTGMSPREYM NNQNKMA
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