| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0477 |
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| Symbol | |
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| ID | 8356583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 573583 |
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| End bp | 575430 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962623 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003120176 |
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| Protein GI | 256419523 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.966563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAG CGGAGTTTCA ACAAATATCA CATACAATAC CCCTTCAGCC TGGTATTTAC
AAGTATTACA GCGAAGCAGG CGAACTGCTT TATGTAGGAA AAGCTAAAAG CCTGCGCAAA
AGGGTCAGCT CTTATTTTGT TAAGAATCAT GATAACTACA AGACCCGTAA GCTTGTAGAA
AACATCCACC ATATTGAATT TACCATCGTT GGCTCTGAAC AGGATGCCTT CCTGCTGGAA
AACTCGCTGA TCAAACAGTT CCAGCCCAAA TTCAATATCA ACCTGAAAGA CGATAAGACT
TACCCGTATA TCGTCATCAA ACACGAATCC TACCCCCGTG TATTCCTGAC CCGTAATGTG
ATCAAAGACG GCTCTGAATA CCTGGGTCCA TTCACTTCCG TAGGCCGCGT ACGCGAACTG
CTGGAAGTGA TCAGATATAA CATTCCCCTG CGTACCTGCA ACCTGAATCT CTCTCCGCAG
AATGTCGCCA AAGGGAAGTA TAAAGTCTGC CTGGAATATC ACCTGGGCAA CTGTAAAGGT
CCCTGTGAAG GATTGCAGAC GGAAGAAGAT TACAGGGAAG GCTTACAGCA GGTCAAAAAC
ATCCTTCGCG GCAATCTCTC ACCCGTATTA CAGCTGTTCC GCACACAGAT GCAGGAACAT
GCCATGAACA TGGAGTTTGA AAAAGCGGAG ATCGTCCGTA AGAAGATAGA AAGTCTGCAG
GCTTACCAGT CTAAATCCAC CATCGTGGGT ACCCGGGTCG GTAATGTCGA TGTCTTCTCC
ATCATCAGCG AAGGCAATTA CGCGTATGTC AACTACCTGC GCGTATTGAA CGGCACCATT
GCAGATACGA AGACCGTCAC GCTGGAAAAG AAACTGGAAG AAGATGATAC AGAAGTACTG
ACCTATGCCG TCGGTTACCT CCGGGACGCC TTCCAGAGTC TTGCCCGGGA AATCATCGTT
CCCCTGGAAA TAGAATACCC GGAAGAACAC GTCACTATCT CTGTACCCAA AGGCGGAGAC
AAAAAGAAAC TGCTGGAACT CTCTGAAAAG AATGTGAACT ATTTCAAGGA GGAGCTGTAC
AGGAAAAAGA TCCTGCACCT GGAAGGCAAA AGCGATATGG AGAAAAAGAA GGTATTGTAC
CAGTTGCAGG CCGACCTCGA ACTCCAGGAA TTACCATTGC ACATCGAATG TTTCGATAAC
TCCAACTTCC AGGGTGCTTA CCCGGTTTCT GCCTGCGTGG TGTTCAAGGA CGGTGTTGCC
TCCAAAAAGG ACTACCGCCA TTTCAATATC AAAACGGTTC AGGGTATTAA CGACTTCGCC
TCTATGAAGG AAGTGGTATA CCGCCGTTAC AGCCGCTTAC TGGCCGAACA GCAACCTTTG
CCGCAGCTGG TCATCATAGA TGGAGGTAAA GGACAGCTGG GATCTGCGAT GGAAAGTATC
CGGGCGCTGG ACCTTATCGG CAGTATGACC GTAGTAGGGC TGGCGAAGAA CGAAGAAGAG
ATCTTCTTTC CGGGAGATAA AGACAGTATC AAACTGCCTT ACGACAGTGA AAGTCTGAAG
CTGATCCGTC GTGTGCGTGA TGAAGTGCAC CGTTTCGGCA TCACTTTCCA TCGTCAGAAA
CGCAGTAAAG GCACTTTTAA GAACGAATTA GAGGCTATTA AGGGCATCGG CGAGAATACG
GCCACCCAGC TCCTGAAAAC CTTCCGTTCG GTAGCTAAAA TCAAATTATT ATCAGAGGAT
GACCTTGTAA AGGAAATAGG AGCAGCCAAG GCCCGTCTCG TATACACACA TTTCCATCCG
GCTACAGGAG AAACAGGCCC TGTTACAGAT GCAGATAGTA ATAACTGA
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| Protein sequence | MTAAEFQQIS HTIPLQPGIY KYYSEAGELL YVGKAKSLRK RVSSYFVKNH DNYKTRKLVE
NIHHIEFTIV GSEQDAFLLE NSLIKQFQPK FNINLKDDKT YPYIVIKHES YPRVFLTRNV
IKDGSEYLGP FTSVGRVREL LEVIRYNIPL RTCNLNLSPQ NVAKGKYKVC LEYHLGNCKG
PCEGLQTEED YREGLQQVKN ILRGNLSPVL QLFRTQMQEH AMNMEFEKAE IVRKKIESLQ
AYQSKSTIVG TRVGNVDVFS IISEGNYAYV NYLRVLNGTI ADTKTVTLEK KLEEDDTEVL
TYAVGYLRDA FQSLAREIIV PLEIEYPEEH VTISVPKGGD KKKLLELSEK NVNYFKEELY
RKKILHLEGK SDMEKKKVLY QLQADLELQE LPLHIECFDN SNFQGAYPVS ACVVFKDGVA
SKKDYRHFNI KTVQGINDFA SMKEVVYRRY SRLLAEQQPL PQLVIIDGGK GQLGSAMESI
RALDLIGSMT VVGLAKNEEE IFFPGDKDSI KLPYDSESLK LIRRVRDEVH RFGITFHRQK
RSKGTFKNEL EAIKGIGENT ATQLLKTFRS VAKIKLLSED DLVKEIGAAK ARLVYTHFHP
ATGETGPVTD ADSNN
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