| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0446 |
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| Symbol | alaS |
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| ID | 8356552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 529255 |
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| End bp | 531870 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962592 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003120145 |
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| Protein GI | 256419492 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTC CCGAGATTCG TCAGCAATTC CTGGACTTTT TTGCGTCCAA AGGCCACCAT
ATCATGCCTT CTGCTCCTAT TGTAGTAAAA AACGACCCTA CCCTGTTGTT TACCAACGCG
GGTATGAACC AGTTTAAGGA CTACTTTCTG GGCAATAGGG CGCCGGCCTG GAAAAGGGTG
GCGGATACCC AGAAATGTCT GCGCGTAAGC GGTAAACACA ATGACCTGGA GGAAGTAGGT
ATCGACACCT ACCACCATAC CATGTTCGAA ATGTTAGGTA ACTGGAGCTT CGGTGATTAC
TTCAAAAAAG AAGCGATCGA CTGGAGCTGG GAACTACTTA CAGAAGTATA TAAGCTACCT
AAAGACCGTC TTTATGTGAC TGTTTTTGAA GGAGATGCGA AGGAAAACCT GGAAAAAGAC
CAGGAAGCAT TCGAATTCTG GAAAAAACAT GTTCCGGAAG ACCGCATCCT CATGGGCAAC
AAAAAGGATA ACTTCTGGGA AATGGGTGAT ACCGGTCCTT GTGGCCCTTG CTCTGAAATT
CACGTAGACT GCCGTCCTGA CAGCGAAAGA GCGCTGGTAG ACGGTAAAAC CCTCGTAAAT
GCAGACGATC CGCAGGTAAT CGAAATCTGG AACAACGTAT TCATGCAGTT CAACCGCCTG
AAAGACCGTA GCCTGGAATC ACTCCCCGCT AAACACGTGG ATACCGGTAT GGGCTTCGAG
CGTCTGGTAA GGGTGATCCA GGGTAAAACC TCCAACTACG ATACAGATGT ATTCTCCGGC
ACAATCGGAC ACACGGAAAA ACTGACCGGA CTTAAATATG GCTGTACTGA CAGCAAACCC
GATGTGGCTT TCCGCGTAAT TGCCGACCAT ATCCGTGCGA TCTCCTTCGC TATTGCCGAC
GGCCAGCTGC CATCTAACAC AGGCGCGGGT TATGTCATCC GTCGTATCCT GCGTCGTGCA
GTAAGGTATT ATTTCTCCTT CCTGAATTGG AAGAAACCAC TGCTGCAAGA CCTGGTACCG
GTACTGGCAC AACAGTTTGC CAACGTATTT CCGGAACTGC TGCAACAGGT TGATTTCGTA
CAGAAAGTGG TATTCGAAGA AGAAAACAAC TTCCTCCGTA CCCTGGATAG CGGTATCCGC
AGAATTGAAG ATTTTATGGG CGCTGCGAAA GAGAAATCTG TGGACGGCAA AACTGCCTTC
GAATTATATG ACACCTACGG TTTCCCATAC GATCTGACCA GCCTTATCGC ATCAGAAAAT
GGTTTCAGCG CGGATAAAGA GGGTTTTGAC GCTGCCATGA AAGAACAGAA AGACCGATCC
CGTGCAGCAA CTGAACTGGA TATGGGCGAC TGGACCGTAC TGAACGAAAA TGCAGAATCA
GTATTTGTAG GATACGAGCT GTCTGAAACG GAAACTTCCG TAGCGAAATA CCGTAAGATC
AAGGCAAAAG GTAAGGAACA GTACCAGCTG GTATTGTCAC AGACGCCTTT CTACGCGGAA
AGCGGTGGAC AGGTAGGAGA TACCGGTATC CTGACCTTTG GTGCGGAAAC TATTCAGGTA
ACCGATACCA AAAAGGAAAA TAACCTGATC GTTCATTTTG TCGATAAACT GCCGGCTAAT
ATCACAACTA CTGCTAAAGC AGTGATCAAT AAAAACAACA GGCTCAGTAC TACCATGAAC
CACTCTGCTA CACACCTCCT GCACGCAGCA CTGCGTCAGG TATTGGGTAC ACACGTAGCA
CAGAAAGGTT CCCTGGTGAA TCCTGAATAC CTGCGTTTTG ACTTCTCTCA CTTTGCGAAA
GTAAGCGACG AGGAACTGGC ACAGATTGAA GAGATCGTGA ATGAAAAGAT CCGCGCTAAC
ATCCCTGTAG TGATCAAAGA ACTGCCAAAG GAAGAAGCCC TGAAACTGGG TGCAATGGCA
CTCTTTGGTG AGAAATATGG CGATGTGGTA CGTGTGGTGG TAATGGATCC TGGTTATTCT
GTCGAGCTGT GTGGTGGTAC ACACGTTGGT TCTACCGGCG AACTTGGTAT CTTTAAATTC
ACCTCAGAGG GTGCAGTAGC AGCAGGCGTT CGTCGTATTG AAGCCGTTAC CGGCCGCAAT
GCACTGGCAT TTGTTAATGC ACAACTGCAA CAACTGAAAG ACATCAAAAC AGCACTAAAG
AATCCAAAAG ATATCGTAGC TGTTGTAGAT AACCTGATCA ACGATAAAGC TGCCCTGGAA
AAACGTGTGG AAGCGCTGGA ACTGGAGAAA GTTCGTCAGC TGTCCGCCGG TCTGCAGGCA
GAAGTTGAAA ACGTACACGG TATCAACTTC CTGGGTAAGA TCGTGGATGT AAACAATGCA
GAAGCGCTGA AGCAACTGTG CTTCACGCTG AAAACACAGA TCGATAACCA CGTATTCATA
CTGGCTGCAA ATATCGGCGG TAAAGCGAAT GTCGCACTGA TGATCTCTGA TAACCTGGTT
GCGGAAAAAG GACTGGAAGC ACCGAAGATC ATTAAGGAAA AGATCGCACC TATCATCAAA
GGTGGCGGCG GCGGACAGAA GTCTTTCGCA ACTGCCGGCG GACAGGAAGC TGGTCAGCTG
GATCAGGTGA TCACACAGGT GAAAGCAATG CTGTAA
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| Protein sequence | MTAPEIRQQF LDFFASKGHH IMPSAPIVVK NDPTLLFTNA GMNQFKDYFL GNRAPAWKRV
ADTQKCLRVS GKHNDLEEVG IDTYHHTMFE MLGNWSFGDY FKKEAIDWSW ELLTEVYKLP
KDRLYVTVFE GDAKENLEKD QEAFEFWKKH VPEDRILMGN KKDNFWEMGD TGPCGPCSEI
HVDCRPDSER ALVDGKTLVN ADDPQVIEIW NNVFMQFNRL KDRSLESLPA KHVDTGMGFE
RLVRVIQGKT SNYDTDVFSG TIGHTEKLTG LKYGCTDSKP DVAFRVIADH IRAISFAIAD
GQLPSNTGAG YVIRRILRRA VRYYFSFLNW KKPLLQDLVP VLAQQFANVF PELLQQVDFV
QKVVFEEENN FLRTLDSGIR RIEDFMGAAK EKSVDGKTAF ELYDTYGFPY DLTSLIASEN
GFSADKEGFD AAMKEQKDRS RAATELDMGD WTVLNENAES VFVGYELSET ETSVAKYRKI
KAKGKEQYQL VLSQTPFYAE SGGQVGDTGI LTFGAETIQV TDTKKENNLI VHFVDKLPAN
ITTTAKAVIN KNNRLSTTMN HSATHLLHAA LRQVLGTHVA QKGSLVNPEY LRFDFSHFAK
VSDEELAQIE EIVNEKIRAN IPVVIKELPK EEALKLGAMA LFGEKYGDVV RVVVMDPGYS
VELCGGTHVG STGELGIFKF TSEGAVAAGV RRIEAVTGRN ALAFVNAQLQ QLKDIKTALK
NPKDIVAVVD NLINDKAALE KRVEALELEK VRQLSAGLQA EVENVHGINF LGKIVDVNNA
EALKQLCFTL KTQIDNHVFI LAANIGGKAN VALMISDNLV AEKGLEAPKI IKEKIAPIIK
GGGGGQKSFA TAGGQEAGQL DQVITQVKAM L
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