| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0196 |
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| Symbol | |
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| ID | 8356296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 242680 |
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| End bp | 244380 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644962339 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_003119898 |
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| Protein GI | 256419245 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAA CTGCTGTTGA GCAGCCTGTA ATTTCGCCGT CCCCTAAGGG GAAAGGGCAC
CATAAGGGAT TGTATGTACT CTTCTTTACA GAAATGTGGG AACGCTTCGG TTACTACCTG
ATGATCGGTA TCTTCTTCCT TTATCTCGTA GACCCTGCCG CCAACGGTGG TAAAGGGCTC
GATACAACCA AAGCTGCTGA CCTCGTTGGT TCCTACATCG CATTAGTATA TCTCTCTCCT
TTCCTCGGAG GACTCATGGC GGACCGCTAC CTCGGATACC GCCGGGCCGT TATCCTCGGA
GGCTTCCTCC TCGCTGCCGG ATACTTCTGT CTGGCCGTTC CCGGCGATAT GGCGATGTAT
GTGGCCCTGG GCCTGATCAT CATCGGTAAC GGGTTCTTTA AACCCAATAT CGGTACCATC
CTGGGTAATA TCTACAACAG AGAAGACCTT CGCGCCAAGA AAGATGTTGC CTACAATATC
TTCTACATGG GTGTGAATAT CGGCGCCTTT ATCTGCAACT TCGTAGCCGC CTATCTCCGT
AACCACTACG GATGGGGTCA TGCGTTTGCC GCTGCCGGCG TAGGTATGCT TATCGGACTC
GTTATCTTCA GCACCAACCA GAAAGTAATT GCCTCCGGCG ATATCAGAAA AGAGCCATCT
CCGGATGATA TGCCGATCGG TAAAATCGTA TCTCTCGTAT TTGTACCGGC CATTATCGCC
GCTACGCTCG GTTACTTTAT GCAGGACATC CTGGGACATA CCCTGTTCCA TACCCGCTCC
AACGACGCAT TCATGTTTGC CTGCGTACCG ATCATTATCT TCTATATCCG GTTGTATACC
ACTTCCAAGA AACATGAAGA CAAACGCGGA CTGGGCGCCC TGTTAGCATT CTTCGCAGTT
GCAATCGTGT TCTGGGTAAT CTATAACCAG AACAGTACCG GTCTGACCAT CTGGGCTGAC
CAGTATACCG ACCGTGGTAT GTCCACTACC GTGGAAGAAG CCGCTAAACC ACTGGGTATG
CTGCAAACAG TGACCACAGA GCCGCACGCC GTTACACAGG TAGATGAGCA CTTCCGTGCC
GTAACCGACG CCAGTGGTAA AACCCTGGAA ACACAGGGTC CTGACCCTTA CTTCCAGAAC
CTGCCCAAAG ACCAGTGGCC GAAAGAAGGT AAAATGAGAC TGATCTCCAC CGAGATCTTC
CAGTCCATCA ACCCATTCTT TATCGTGGCA TTCAGTCTCA TGGTAGTAGG TCTCTTCGGC
TGGCTGGCCA AACGCGGTAA GGAACCCACC ACACCTGTGA AGATCGCGAT GGGTATCTTC
CTGGCAGGCG CTTCCTCCCT GCTCATGGTG GTAGCTGCGT CAATGACCAA CGTGTACCTC
GATAAGTCAT CTATGGCATG GCTGTTTGGC ACCTACGCCG TATTTACGGT AGGTGAGATC
CTGGTAAGCC CGATCGGTCT TTCTATGGTA TCCAAACTGT CTCCTCCACG TGTAACCGCC
CTGATGATGG GTGGCTGGTA CCTGGTAAAT GCGATCGCCG GTAAAGTGGC GGGTCTGATG
GCGACCTTCT GGGACGAATT CATCGACAAG AAACTTTACT TCCTGATCCT CGTAATATCT
GCCGCTGTTG CAGGTGTTGT GATGCTGATG ATCAGCAAAT GGATCGCGCA GGTCGTGAAA
GAAAAGACGG GATCTTACTA A
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| Protein sequence | MTQTAVEQPV ISPSPKGKGH HKGLYVLFFT EMWERFGYYL MIGIFFLYLV DPAANGGKGL
DTTKAADLVG SYIALVYLSP FLGGLMADRY LGYRRAVILG GFLLAAGYFC LAVPGDMAMY
VALGLIIIGN GFFKPNIGTI LGNIYNREDL RAKKDVAYNI FYMGVNIGAF ICNFVAAYLR
NHYGWGHAFA AAGVGMLIGL VIFSTNQKVI ASGDIRKEPS PDDMPIGKIV SLVFVPAIIA
ATLGYFMQDI LGHTLFHTRS NDAFMFACVP IIIFYIRLYT TSKKHEDKRG LGALLAFFAV
AIVFWVIYNQ NSTGLTIWAD QYTDRGMSTT VEEAAKPLGM LQTVTTEPHA VTQVDEHFRA
VTDASGKTLE TQGPDPYFQN LPKDQWPKEG KMRLISTEIF QSINPFFIVA FSLMVVGLFG
WLAKRGKEPT TPVKIAMGIF LAGASSLLMV VAASMTNVYL DKSSMAWLFG TYAVFTVGEI
LVSPIGLSMV SKLSPPRVTA LMMGGWYLVN AIAGKVAGLM ATFWDEFIDK KLYFLILVIS
AAVAGVVMLM ISKWIAQVVK EKTGSY
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