| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0079 |
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| Symbol | |
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| ID | 8356176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 92363 |
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| End bp | 94615 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962224 |
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| Product | cell wall/surface repeat protein |
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| Protein accession | YP_003119786 |
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| Protein GI | 256419133 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02543] Listeria/Bacterioides repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACAC AACTACTACT GGCACTCGCG TGCCTTCTTG GAGAAGGTAT GACCTATGCA
CAAACCCCTT TGTATGTTGC TCCCGGCGGC TCCGCCTCCA ACCCCGGTAC CAGCATCAAT
GCACCGACTA CACTCGCCAA TGCACTGGCG ACTATTCCCG CTGGCGGTAC CATTTATCTG
AGAGGAGGCA CTTATAGTTT ATCCGCATCT GTCATTATTC CTGCCACCAA CAACGGTACC
GCTTCGGCCA ACAAAAATGT TGTTGCCTAT AGCACAGAAG TCCCCGTATT GAACTTCTCC
GCACAGGCAA TCGCTGATGC CAACCGTGGA TTAGTACTGG ATGGTGATTA CTGGCATTTC
ACCGGTATAA CCATCACGGG CGCAGGTGAC AACGGTATGT TACTCGCAGG CAATAACAAC
ATCATTGAGA AATGTATCTT CAGTAAAAAC CATGACAGCG GATTACAACT CAGCCGCTAT
GTAACGAGTA ACACAACGAT TGGTTCATGG CCATCCAACA ACCTCATTTT AAACTGTGAA
GCATTTGACA ACCAGGATCC TGATAATGAA GATGCGGATG GTTTCGCCGC TAAATTAACA
TGCGGTACCG GTAATGTTTT CAGAGGCTGT ATCTCCCATC ATAACATTGA TGACGGATGG
GATCTCTATG CAAAAGATGA TACAGGTCCT ATCGGTCCGG TGACCATTGA CAACTGCGTA
GCCTATAGCA ATGGTACGCT CAGCACAGGC AGCACTTCCG GTAATGGTGA TAAAAACGGC
TTTAAACTCG GTGGATCCGG TATTGCCGTG AATCATATCA TACGCCGTAG CGTAGCATTT
AACAATGGCC ACCACGGATT TACCGATAAC AATAACCCCG GTAATATCGA AGTGACTAAT
AATACCAGCT ACAATAATGC GGAATCTAAT TTCAACTTCA GAGAAGGCAG TACGGCCACT
TTCCGTAATA ACCTGTCTTT CAATGCAGGC TCCAGTGACA AGAGTAATGG TACGGAAGTA
GGGAGCAGTA ATGTATGGTG GAAAAACAAT GTCAGCACTA ACAGTGGTGG TCTTGTAGTG
AGCAGCGCCG ACTTTATTGC TACCTCTCCA TCCGTAGGCA AAAACACGGA TGGTAGTCCG
AATCTGGGCA ACTTCCTGGC CCTGGCTTCC GGCAGCGATA TGATCAATGC CGGTGTTATT
ACCAGCGGCA TTACTTACAG CGGTTCTGCA CCGGATATAG GCGCCCGTGA ATCAGGTAGC
ACTACCAATC CAGGTACCTA TTCGCTGAGC ATCACGGCGT CTCCGTCTGC CGGCGGTACT
GTTACAGCCA GTCCGAATGC CTCCTCCTAC ACAGCAGGTA CGGTAGTGAC GCTTACAGCT
GCTGCTGCCA GTGGTTATAC CTTCTCCGGA TGGAGTGGTG CTGCCAGTGG TACCTCCGCC
ACCACCACAG TGACCATGAA CAGTAACCAG GTTGTTACAG CGAACTTTAC TGCCAATAAC
GGCGGTGGTA ACACCTTGCG CATCGATGAC GCAGCTACCA CTACCAGCGG CTATTGTGGC
GCTGATGGTA GTCGCCAGAA CAGTTATAGC GGCGCTGATG GCGGTTACTA TATCAACCTG
TCTAACTCCG CAGCCAAAGG TGTGAATTAC ACTATTACAG TGCCAGCTGC CGGTACTTAT
TCCTTTGTAT GGAGATATGC CAATGGTGGT GCAAACGTCT CTACAACTGC AAGACTATTG
GTAAATGGCA ACACCGCTGT ATCCAATGTA TCATTCCCCA AAACAAGCGC ATGGACATCC
TGGACAACGA CAGCCGCAGT TACAGCAACG CTGGCTGCCG GTACAAATAC GGTACGTATA
GAGACTACTT CTTCAACAGA ATTTGCCAAT ATCGACTGGC TGGAAGTAAC AGGGAATAAT
CCGGCTGCAG GCACCTGTGG CAGCGCACTG CTGAACAATT TATCTTATAA ATACGAAGCA
GCAGAAACAG CTACTATCAG CGAAGCAGCA AAGATTTATC CGAATCCTGT AGTGAATAAC
GCTACGATCA GCTTCTATAA CAGTAAAGAA ACAAGAGTAG CAGTGAAGAT ATTTGATGCA
AACGGCGCAT TAATCAACAA TGTGAGCAAC CAGCGCTATC CTGCTGGCCA CAACCAGATC
AATGTTGACT GTAGCAGATT AGTCAAAGCG GTCTACTTCA TCAGGGTAGA GCGGAATGGG
AACAATGAAA CATTAAGAGT GGTGAAGCAG TAA
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| Protein sequence | MRTQLLLALA CLLGEGMTYA QTPLYVAPGG SASNPGTSIN APTTLANALA TIPAGGTIYL
RGGTYSLSAS VIIPATNNGT ASANKNVVAY STEVPVLNFS AQAIADANRG LVLDGDYWHF
TGITITGAGD NGMLLAGNNN IIEKCIFSKN HDSGLQLSRY VTSNTTIGSW PSNNLILNCE
AFDNQDPDNE DADGFAAKLT CGTGNVFRGC ISHHNIDDGW DLYAKDDTGP IGPVTIDNCV
AYSNGTLSTG STSGNGDKNG FKLGGSGIAV NHIIRRSVAF NNGHHGFTDN NNPGNIEVTN
NTSYNNAESN FNFREGSTAT FRNNLSFNAG SSDKSNGTEV GSSNVWWKNN VSTNSGGLVV
SSADFIATSP SVGKNTDGSP NLGNFLALAS GSDMINAGVI TSGITYSGSA PDIGARESGS
TTNPGTYSLS ITASPSAGGT VTASPNASSY TAGTVVTLTA AAASGYTFSG WSGAASGTSA
TTTVTMNSNQ VVTANFTANN GGGNTLRIDD AATTTSGYCG ADGSRQNSYS GADGGYYINL
SNSAAKGVNY TITVPAAGTY SFVWRYANGG ANVSTTARLL VNGNTAVSNV SFPKTSAWTS
WTTTAAVTAT LAAGTNTVRI ETTSSTEFAN IDWLEVTGNN PAAGTCGSAL LNNLSYKYEA
AETATISEAA KIYPNPVVNN ATISFYNSKE TRVAVKIFDA NGALINNVSN QRYPAGHNQI
NVDCSRLVKA VYFIRVERNG NNETLRVVKQ
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