Gene Caci_8884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8884 
Symbol 
ID8340277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10293878 
End bp10294318 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content74% 
IMG OID644961974 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003119538 
Protein GI256397974 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT TTCACGTCGA CCGGGCCGGC AGCGTCCCGG CCTACGCCCA ACTGGTGCAG 
CAGGTCCGCG AGGCCCTGCG GCTGGGCCTG CTGCACCCCG GCGACAAGCT GCCCACGGTC
CGGGAGGTCG TCACCTCCTG CGCCGTCAAC GCCGCGACCG TCCTGAAGGC CTACCGCGAG
CTGGAGCTCT CCGGTCTGGT CGAGGCCCGG CAGGGCGCCG GGACCTACGT CTCCGGCACC
CTCGGCGGCG CCGCCGACCA GGCGGTGATG GACGAACTGC GCGGCCGGTT GACCGGCTGG
GTCGGCGACG CCCGGACCGC CGGCCTGGAG GACGACGACA TGCGCGCCCT GATGACCTCG
GTGCTCGCGG AGCCGCCGGG GGAGCTGACG GCTGAGCAGC GCGCCGCCTC CGCCCCCTCG
CAAGACAGAG CACGGCGATG A
 
Protein sequence
MIDFHVDRAG SVPAYAQLVQ QVREALRLGL LHPGDKLPTV REVVTSCAVN AATVLKAYRE 
LELSGLVEAR QGAGTYVSGT LGGAADQAVM DELRGRLTGW VGDARTAGLE DDDMRALMTS
VLAEPPGELT AEQRAASAPS QDRARR