Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8884 |
Symbol | |
ID | 8340277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10293878 |
End bp | 10294318 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644961974 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003119538 |
Protein GI | 256397974 |
COG category | [K] Transcription |
COG ID | [COG1725] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATT TTCACGTCGA CCGGGCCGGC AGCGTCCCGG CCTACGCCCA ACTGGTGCAG CAGGTCCGCG AGGCCCTGCG GCTGGGCCTG CTGCACCCCG GCGACAAGCT GCCCACGGTC CGGGAGGTCG TCACCTCCTG CGCCGTCAAC GCCGCGACCG TCCTGAAGGC CTACCGCGAG CTGGAGCTCT CCGGTCTGGT CGAGGCCCGG CAGGGCGCCG GGACCTACGT CTCCGGCACC CTCGGCGGCG CCGCCGACCA GGCGGTGATG GACGAACTGC GCGGCCGGTT GACCGGCTGG GTCGGCGACG CCCGGACCGC CGGCCTGGAG GACGACGACA TGCGCGCCCT GATGACCTCG GTGCTCGCGG AGCCGCCGGG GGAGCTGACG GCTGAGCAGC GCGCCGCCTC CGCCCCCTCG CAAGACAGAG CACGGCGATG A
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Protein sequence | MIDFHVDRAG SVPAYAQLVQ QVREALRLGL LHPGDKLPTV REVVTSCAVN AATVLKAYRE LELSGLVEAR QGAGTYVSGT LGGAADQAVM DELRGRLTGW VGDARTAGLE DDDMRALMTS VLAEPPGELT AEQRAASAPS QDRARR
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