| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8285 |
|---|
| Symbol | |
|---|
| ID | 8339664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9596298 |
|---|
| End bp | 9598382 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961371 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003118949 |
|---|
| Protein GI | 256397385 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.493669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTCG TGCGGCCCGC TGTGGCGCTG GCGGCGGCGA CGCTGTTGAC CGGGGGTGTC
TACGTCGCGG TCCGCCTCGA CCGCGCCGCC GAGTTCGCCC ACGGCACCTC GGTCACGGTG
ACCTTCGGCG TGTTGTTCGC GCTGTACCTG CTCGGCGCGT GGTCGGTGTC GGGGCTGCGG
GAGCGGTGGG CCCGGTGGGT GACTCTCGCC GGTGCGACGG CCATGCAGGT CGCGGCGTTC
ACCACGGCGC CGCGCTACTC CGACGACCTG TACCGCTACG TGTGGGACGG CCGTGTCCAA
GCGGCGGGCA TCGATCCCTA CCGCTACGTC CCGATGGCGA CCCGCCTCGC CGGTCTGCGC
GCCGGATCCG GCCTGTTCCC CCCGACCGAT CGCGGGCTCG ACCCCTCCCA CTGCGTGATC
GCCAGCCCGG GCATCACCGC CGGCTGTACG CGCCTCAACC GGCCGCTCGT CCACACGATC
TACCCGCCGG TCGCCGAGGC GTACTACTAC CTCGCGCACT GGTGGGGACC GCGCGGAATC
CAGATTTCGG CGGCTGTGCT CGCCCTCGGC ATCACGGTTC TCCTCCTGGT CGGACTGCCT
CGCATCGGCG TCGACTCCCG GAACGCGGTG CTGTGGGCCT GGTGCCCGAC GGTGGCGGTC
GAGGCGGGCA ACGGCGGGCA CGCCGACATC CTCGCGGTGC TGTTCACCGC CTGCGCGTTG
CTGGCATTGG CCTCGAAGCG GGTCGCCAGC GGCGGAATCC TGCTCGGTCT GGGCATCGCG
GCGAAGGTGA CGCCTGCTTT GGCGGTACCA GCGGCGCTCC GACGTCGGCC CTTTGTTCTG
CTGGGATCGC TGAGCGCCGT GGTGGTCGGG GTGTATCTGC CCCACGTTCT GGCCGTCGGC
AGCGGAGTCG AAGGCTTCCT GGGCGGCTAC CTGCATGAGG AGGGATACCA GAGCGGCACG
CGGTTCGCGC TCCTCGACGC GGTCCTGCCG ACGTCACTGG TCAAGCCGGC GGCGGTGCTG
GTCCTGGCGG TGACGACGAT TCTGGTCTGG CGGCTGAGCG ATCCGGAACG GCCTTGGCAC
GGCGCGCTGA TCATGGCAGG AGTCGGATTC CTGGTCACCG CGCCGCCGCT GGCCTGGTAC
GCCGAGCTGC TGGTCCTGTT CGTCGCGTTC GCGGGGTGGC GGAGCGCCGC GTGGCTCGGG
ATCGCATACG CCGGATACAT GGTGCAGTCG GGCACCGCAC CGCTTCAGGG ATACGGCGGT
GCGCTCGTGG TGGTCGTGGC TGTCTATGGC GGTCAGTTGG TTATCAAGGG ACTGGGTCTC
CGATCGGCGG CACGGCGGCT TGGAGCGGAC GGCGTCGGCG CCGATCTCGA TCGCGATCCG
GATCTGGATC TGGATCTGGA CCCCGACTTC GACCTCGACC GCCCCGGTCT GACCGACGTG
ATCCTCCCGT GTCTCGACGA GGCCGGAGCG CTTCCCTATG TCCTGTCACG GATTCCGGCC
GGCTATCGAG CCATCGTCGT CGACAACGGT TCGACGGACG GGTCCGCCGA GGTGGCGGCG
TCGCTCGGCG CGCTGGTCGT GCACGAGCCG CGCCGCGGAT TCGGCGCCGC GTGCCACGCC
GGGCTGCTCG CCGCCACCGC GGACATCGTC TGCTTCCTCG ACTGCGACGG CTCCTTCGAT
CCCGAAGACC TGCCGAAGGT CGCCGACGCG GTCCGTCGCG GGCAGGCCGA TCTCGCTCTC
GGCCAACGCA GGCCACTGAC TCGCGGCGCC TGGCCGCCGC ACGCCCGGTT GGCGAATCGG
TTGCTGGCGA GGCGCATCAG GCGCGAGACC GGCGTCCGGA TCCGGGACCT CGGACCGATG
CGTGCCGCTC GCCGGGAGGA CCTGCTGGCG CTCGGGATCG AGGACCGGCG GTTCGGCTAT
CCGCTGGAGA TGGTGCTCAA GGCGGCGCGC GGCGGCTGGC GGATCACGGA GACCGACGTC
CCGTACGCGC CGCGCACCGG CAAGTCGAAG GTGACCGGAA CGGTCGGCGG CACCGTCAAA
GCCGTCCGCG ACATGCGCCG AGTCTGGAGG GCCGCGACCC GATGA
|
|---|
| Protein sequence | MRFVRPAVAL AAATLLTGGV YVAVRLDRAA EFAHGTSVTV TFGVLFALYL LGAWSVSGLR
ERWARWVTLA GATAMQVAAF TTAPRYSDDL YRYVWDGRVQ AAGIDPYRYV PMATRLAGLR
AGSGLFPPTD RGLDPSHCVI ASPGITAGCT RLNRPLVHTI YPPVAEAYYY LAHWWGPRGI
QISAAVLALG ITVLLLVGLP RIGVDSRNAV LWAWCPTVAV EAGNGGHADI LAVLFTACAL
LALASKRVAS GGILLGLGIA AKVTPALAVP AALRRRPFVL LGSLSAVVVG VYLPHVLAVG
SGVEGFLGGY LHEEGYQSGT RFALLDAVLP TSLVKPAAVL VLAVTTILVW RLSDPERPWH
GALIMAGVGF LVTAPPLAWY AELLVLFVAF AGWRSAAWLG IAYAGYMVQS GTAPLQGYGG
ALVVVVAVYG GQLVIKGLGL RSAARRLGAD GVGADLDRDP DLDLDLDPDF DLDRPGLTDV
ILPCLDEAGA LPYVLSRIPA GYRAIVVDNG STDGSAEVAA SLGALVVHEP RRGFGAACHA
GLLAATADIV CFLDCDGSFD PEDLPKVADA VRRGQADLAL GQRRPLTRGA WPPHARLANR
LLARRIRRET GVRIRDLGPM RAARREDLLA LGIEDRRFGY PLEMVLKAAR GGWRITETDV
PYAPRTGKSK VTGTVGGTVK AVRDMRRVWR AATR
|
|---|
| |