Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8053 |
Symbol | |
ID | 8339431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9345900 |
End bp | 9347171 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961138 |
Product | geranylgeranyl reductase |
Protein accession | YP_003118717 |
Protein GI | 256397153 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.661392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCTCGG AGAACGTCGC CGACGTCATC GTGGTCGGGG CCGGGCCCTC GGGCTCGGCG ACGGCCCACC ATCTGGCCAC CGCCGGCTTG GACGTCCTGC TGCTGGAGAA GTCCCAGTTC CCGCGGGAGA AGGTGTGCGG CGACGGCCTG ACGCCGCGCG CGGTGAAGTC GCTGGTGCGG ATGGGCGTCG ACACCTCCGA GGAGGCCGGC TGGCTGCACA ACAAGGGCCT GCGGATCATC GGCGGCGGCA TGCGGCTGGA GATGCCGTGG CCGGAGCTGG CGGCGTACCC GAACTACGGG CTGGTGCGCC CCCGCGCCGA CTTCGACCAG ATCCTGGCGC GCCAGGCGGA GAAGTCCGGC GCCCGGCTGC ACGAGAACAC GAACGTCACC GGTCCGGTGG TGGACCCGCG CAGCAACCGG GTGATCGGCG TGACCGCGCG CATCACCGAC GCCGACGGCG GCAAGCGCGA GACCTCCTTC CGCGCGCCGC TCATCGTCGC CGCCGACGGT AACTCCACCC GGCTGTCCAT CGCGCTGGGT CTGCACAAGC GCGACGACCG CCCGATGGGT GTCGCCTATC GCACCTACTA CAAGTCGCCG CGCACCAACG ACGACTACCT CGAGTCCTGG CTCGAGCTCT GGGACGGCGA GCGCCTCCTG CCCGGCTACG GCTGGGTCTT CGGCATGGGC GACGGCACCT CCAACGTGGG CCTGGGCATC CTGAACACCA CCAAGTCCTT CCGCAACGTG AAGTACCCGG ACCTGCTGCG CGCCTGGCTG AAGAACACCC CCGACGAGTG GGGCTTCAAC GAGGAGAACC GCACCGAGCC GATCCGCGGC GCCGCGCTGC CGATGGGCTT CAACCGCCAG CCGCATTACA CCCGCGGCGT GCTGCTCGTC GGCGACGCCG GCGGCATGGT GAACCCCTTC AACGGCGAGG GCATCGCCTA CGCGATGGAG TCCGGCGAGC TCGCCGCGGA CGTCATCGCG CAGGCGCTGG CGCGTCCGGC GGGCCCGGAG CGGGAGCTGG CGCTGTCGGC GTACCCGCGC GTGCTGAAGG AGACCTATGG CGGCTACTAC ACGATGGGCC GCCTGTTCGT CAGCCTGATC GGCAACCCGA AGGTGATGCG CCTGGCGACC CAGCGCGGCC TGTCGCACCC GATGCTGATG CGCTTCACGC TGAAGATGCT CGCCAACCTC ACCGACCCCA AGGGCGGCGA CGCGATGGAC CGCATCATCA ACGCGATGGC GAAGATCGCC CCCGACGCCT GA
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Protein sequence | MPSENVADVI VVGAGPSGSA TAHHLATAGL DVLLLEKSQF PREKVCGDGL TPRAVKSLVR MGVDTSEEAG WLHNKGLRII GGGMRLEMPW PELAAYPNYG LVRPRADFDQ ILARQAEKSG ARLHENTNVT GPVVDPRSNR VIGVTARITD ADGGKRETSF RAPLIVAADG NSTRLSIALG LHKRDDRPMG VAYRTYYKSP RTNDDYLESW LELWDGERLL PGYGWVFGMG DGTSNVGLGI LNTTKSFRNV KYPDLLRAWL KNTPDEWGFN EENRTEPIRG AALPMGFNRQ PHYTRGVLLV GDAGGMVNPF NGEGIAYAME SGELAADVIA QALARPAGPE RELALSAYPR VLKETYGGYY TMGRLFVSLI GNPKVMRLAT QRGLSHPMLM RFTLKMLANL TDPKGGDAMD RIINAMAKIA PDA
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