Gene Caci_6545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6545 
Symbol 
ID8337909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7540579 
End bp7541325 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID644959641 
Producturidine kinase 
Protein accessionYP_003117234 
Protein GI256395670 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0840301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0502519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCCCG CATCCAAGGT CGCGCTCTAC GCTGAAACCG TGAGAGAGGC AGCCATAAAC 
CAAGGCACCC GCAGCGAGCT CATCAGTAGC CTGGCCGAGG CGCTCAGGTC CGCCACGACC
ACGATCACGC ACCCGCTGCG GGTCGCCATC GACGGCGCGC CCGCCTCCGG CAAGACCACA
CTGGCCGACG AACTCGCCAC CGTCCTGCGC GCGCAGGGCC GCGACGTCAT CCGCGCGACC
ATCGACGACT TCCTCTTCCC TCGCGCCGAA CGCTACCGAC GCGGCCAATA CTCAGCGGAA
AGCTGCTACT TCGACGCCCA CGACCGCGCC GCACTGTGCA GGGTTCTGCT CGATCCGCTG
GGCCCGGGCG GGGACCGAAA GTTCCAAACG TCGGTCTACG ACCGAGACAC CGACACACCA
CTGTCCCTGC CGGCCGCCGC CGCGCCCACA GACGCTGTAC TGCTCTTCGA CGGCGTCTTC
CTCCTGCGTC CAGAGCTGAT CGACCGGTGG GACCTGCGCA TCTTCGTATC CCTCCCGCTC
GAGCAGACGA TAGACCGTGC CCGGAGCCGA GGCACCGCAC TGGCTGGATC TGCGGCCGTC
ATCGCCGACA TCGAACGGTC CTGGCAGTAC CGCTACATCC CGTCCCAACA GCTCTACTTC
GCCACCGCCC ACCCCACCGA CCACGCCGAC ATCATCGTGT ACAACGATCA GCTTCAGCGG
CCGGCCTGGG AAGTCCGACT TCACTGA
 
Protein sequence
MCPASKVALY AETVREAAIN QGTRSELISS LAEALRSATT TITHPLRVAI DGAPASGKTT 
LADELATVLR AQGRDVIRAT IDDFLFPRAE RYRRGQYSAE SCYFDAHDRA ALCRVLLDPL
GPGGDRKFQT SVYDRDTDTP LSLPAAAAPT DAVLLFDGVF LLRPELIDRW DLRIFVSLPL
EQTIDRARSR GTALAGSAAV IADIERSWQY RYIPSQQLYF ATAHPTDHAD IIVYNDQLQR
PAWEVRLH