Gene Caci_6443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6443 
Symbol 
ID8337807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7434721 
End bp7435401 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content69% 
IMG OID644959543 
Producturease accessory protein UreG 
Protein accessionYP_003117136 
Protein GI256395572 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.187428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.14632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG CCCTGGGGGC CGCGCGTACC GGCGGACCGC TCCGCATCGG CATCGGCGGT 
CCCGTCGGCT CGGGCAAGAC CGCCCTCGTG GCAGCCCTGT GTCGTGCACT GCGCGACGAT
TACGCCCTGG CCGTGGTGAC CAACGACATC TACACCCGTG AGGATGCCGA GATCCTGCTG
CGCCAAGGCG TGCTCGAACC GGAACGGATC TCCGCGGTGG AGACCGGCTG TTGTCCGCAC
ACCGCGATCC GCGACGACAT CTCGGCCAAC CTCGAAGCCG TCGAAGCCCT CGAACGGCGC
TTCGCCCCCC TGGACCTGGT GCTCGTCGAA AGCGGCGGAG ACAACCTCAC CGCGACCTTC
AGCAAGGGCC TGATCGACCG GCAGATCTTC GTGATCGACG TCGCCGGCGG AGACAAAGTC
CCTCGCAAGG GCGGCCCCGG CATCATCTCC TCCGATCTGC TGGTGATCAA CAAGACGGAC
CTCGCAGAGC TGGTCCACGC GGACCTCGAC GTGATGCGCC GCGACGCCAA GCGCCAGCGC
ACCGACGCGC ACGGAACCGA ACGCCCCACG GTGCTCATGT CGCTCGCCGC CGACCCGCTC
GCCGCCGACG TCGCGGCGTG GACCACCGCT CTGATCGCCC AGCGCCGCGC CGGCGCGAGC
ACTGTCCGGT CCCCGGCATG A
 
Protein sequence
MSFALGAART GGPLRIGIGG PVGSGKTALV AALCRALRDD YALAVVTNDI YTREDAEILL 
RQGVLEPERI SAVETGCCPH TAIRDDISAN LEAVEALERR FAPLDLVLVE SGGDNLTATF
SKGLIDRQIF VIDVAGGDKV PRKGGPGIIS SDLLVINKTD LAELVHADLD VMRRDAKRQR
TDAHGTERPT VLMSLAADPL AADVAAWTTA LIAQRRAGAS TVRSPA