Gene Caci_6069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6069 
Symbol 
ID8337432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6990824 
End bp6991264 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content76% 
IMG OID644959173 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003116767 
Protein GI256395203 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.683287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATG ACATCGGACG GGAGATCGCC GCATCCTTCG GCGTCCTGAT CCAGCGCAGC 
ACCCGCTCCG GGCTCTACGC CGCCCTGGTC GAGGGCATCG CCGACGGCCT CGACGAGAAC
GCCTACCCGG TGCTCAGCGG CCTGGCCCGG ACCGGCCCGC GCAACGCCGC CGACCTGGCC
GCGGTGGTCG GGCTGGACCG CTCGGGGGTG AGCCGCCACG CCTCGCGGCT GGAGGCCGCA
GGGCTGGTCC GGCGCGAGCC CGATCCCGCC GACCGGCGCT CGGTGCTGCT GGTGCTCACC
GACGCCGGCG CCGCGGCGGT GGAGCAGATG CGCGGCCGCT TCGTCGAGCG GGTCTCCGCC
TCGCTGGCGG CGTGGCCGCC GGGGGAGGCC GAGGCCTTTG CCAGAGGACT GCGGCGCTTC
GTCGAGGAGG GACCGTTCTG A
 
Protein sequence
MDDDIGREIA ASFGVLIQRS TRSGLYAALV EGIADGLDEN AYPVLSGLAR TGPRNAADLA 
AVVGLDRSGV SRHASRLEAA GLVRREPDPA DRRSVLLVLT DAGAAAVEQM RGRFVERVSA
SLAAWPPGEA EAFARGLRRF VEEGPF