Gene Caci_5988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5988 
Symbol 
ID8337351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6909417 
End bp6910232 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID644959093 
Productclass II aldolase/adducin family protein 
Protein accessionYP_003116687 
Protein GI256395123 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCGAACCGGA CGTCCAGCAG GTCGAGCAGG CTGTCGGGAA CGTCGCGCAG 
GAGCTCTACT TCCCGGTGCC GCCGACCTTC GACAACGTCG CGGCGGAGCG GCAGTACCGC
AAGGAGCAGC TGGCCGCGGG CTTCCGGATC TTCGGCAGGT TCGGCTTCTC CGAGGGCGTG
GCCGGGCACA TCACGGTGCG CGACCCGGAG TTCCCGGACA CCTTCTGGGT CAACGGTTTC
GGGCAGTCCT TCAGCCAGAT CAAGGCCTCG GACCTGATCC GCTGCGACCA CGAGGGCACC
GTCCTGGAAG GCCGTTTCCA CGTCAACCGC GCGGCGTTCG TCATCCACGC CGAGGTGCAC
CGCGCGCGCC CCGACGTGAT CGCCGCCGCG CACTCGCACT CCTTGCACGG CAAGGCTTTC
GCCTCCCTGG GCGTCCCGCT GGACCCGATC ACGCAGGACG CGTGCGCCTT CTTCGAGGAC
CACGGCCTGT ACGCCGGCTA CGGCGGGGTC GCCAGCGACG TCGAGGAGGG CAAGCGCATC
GGCGCGGCGC TGGGCGGGTA CAAGGCCGCG ATCCTGCAGA ACCACGGCCT GATCACGGTC
GGCGAGTCGG TCGCCGAGGC GGTGTGGTGG TTCGTGACGA TGGAGCGCTC GTGCCAGGCG
CAGCTGCTGG CGATGGCGGC CGGCACGCCC AAGCTGATCG ACCGCGAGAC CGCGCTGATG
GTGCGCGAGC AGATCGGCGG ACACTTCGCC GGGTGGTTCC AGGCGCGTCC GCTGTGGGAC
CAGATCGTGG CGTCCGACCC GGACCTGTTC GACTAG
 
Protein sequence
MTTTEPDVQQ VEQAVGNVAQ ELYFPVPPTF DNVAAERQYR KEQLAAGFRI FGRFGFSEGV 
AGHITVRDPE FPDTFWVNGF GQSFSQIKAS DLIRCDHEGT VLEGRFHVNR AAFVIHAEVH
RARPDVIAAA HSHSLHGKAF ASLGVPLDPI TQDACAFFED HGLYAGYGGV ASDVEEGKRI
GAALGGYKAA ILQNHGLITV GESVAEAVWW FVTMERSCQA QLLAMAAGTP KLIDRETALM
VREQIGGHFA GWFQARPLWD QIVASDPDLF D