| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5877 |
|---|
| Symbol | |
|---|
| ID | 8337238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6784875 |
|---|
| End bp | 6786134 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644958981 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003116576 |
|---|
| Protein GI | 256395012 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.473152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGACCG CTGCCGCGGC GCTCGCCGGC GCCGCGGTGA TCGAGGCGTT GGCACGCGGC
GCGGTGCACC ACCGGCCCGG GACGTCGGGG GTGCTGCTGA CGGCGGTGTT CCTGGCCTTG
TGCGCGACGG CGCCGCTGGG GTTCCTCGGC GTGATCGGCG CGGCGACGGC GGTGGTCGCA
GCGGCCGTGC TGGCGTTGAC GATCACCGGG ATGCTGCCGG TGGCGTCGGC CGCGGCGGTG
GTCGTGGCGA TGTACCGGTT GGGGTGGGGC GCGGGCTCGT TGGCCGAGCC GCGGGCGCGG
GGGCGTGCGC AGGAGTCGGG GCAGATACGG ATGCGCAGGC TGGCGGGGAT TCTCGCGGCG
GGGCTGGTGG TGCCGTTTCC GGTGATCGCG TTGAGCGTGT CGCGGACTTC TGACGCGGGA
GTGGTCGCGG TCGTGCTGAC GGCACTGGCT CCGGCGGCGG CGTTCGCGGG CAATGCCGCG
CACGCACGGT CCGAGGCGCG CGTGCATCAG GCGGCGCGCG AGGCGGTGGC GCGTTCGCTG
GTCGAGCACA CGGCGCGCGG CGAGCGGGCC CGGATCGCCC GGGAGCTGCA CGACGTGGTG
GCGCACCATA TTTCGATGAT CGCGGTGCAG GCTGAGACCG CGCGGCTGGC AACGCCCGGC
ATGCCGCCCG CTGGCGCCGA GCGGCTGCTG GCGATCGGCG ACACGGCGCG CGCCGGACTG
ACGGAGATGC GCCGGCTGCT GGGCGTGCTG CGCGAGGACG CCGGCCCGCC AGACGAGCAG
GAAAGCCGCC ACCCGCAACC GGGACTGGAC CAGCTGCTGG CGCTGGTGGA CGCCGCGCGG
CGGACGTCGG GGGCGACGAC GCGGCTGATC GTGTCGGGCG CACCCGCCGC ACTGGACCCG
GGGGTCGAGC TGGCGGCGTA CCGCATCACG CAGGAGGCAC TGACCAACGC GCGGCGGCAC
GCGGGCGGCG CGCCGGTGGA TGTCGAGCTG CGGTTCACGG CGGAGGCTTT GTGGTTGCGG
GTGCGCGACA GCGGGCCAGG GCCCGGGGCT GGTGTGGGAA CCGGTGACGG CGCTGTGAAT
CAGGCGACTG ATTTGCCAGC CGGCGGACAC GGCGTGTCAG GAATGCGCGA GCGGGCCACG
GCAGTGGGAG GTCGGCTGAC GGCCGGACCA GCGCCGACAG GCGGATTCGT GGTCCAGGCG
GTACTCCCGG CCGGATCGCT CGAGTCGACG AACGAGATCC CCGACGGAGA CACACCGTGA
|
|---|
| Protein sequence | MGTAAAALAG AAVIEALARG AVHHRPGTSG VLLTAVFLAL CATAPLGFLG VIGAATAVVA
AAVLALTITG MLPVASAAAV VVAMYRLGWG AGSLAEPRAR GRAQESGQIR MRRLAGILAA
GLVVPFPVIA LSVSRTSDAG VVAVVLTALA PAAAFAGNAA HARSEARVHQ AAREAVARSL
VEHTARGERA RIARELHDVV AHHISMIAVQ AETARLATPG MPPAGAERLL AIGDTARAGL
TEMRRLLGVL REDAGPPDEQ ESRHPQPGLD QLLALVDAAR RTSGATTRLI VSGAPAALDP
GVELAAYRIT QEALTNARRH AGGAPVDVEL RFTAEALWLR VRDSGPGPGA GVGTGDGAVN
QATDLPAGGH GVSGMRERAT AVGGRLTAGP APTGGFVVQA VLPAGSLEST NEIPDGDTP
|
|---|
| |