| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5866 |
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| Symbol | ligC |
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| ID | 8337227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6773821 |
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| End bp | 6774930 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958970 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_003116565 |
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| Protein GI | 256395001 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.884257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.301201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAGG TGAACCTGCC GGTGCTGCCC CCGGTCGAGC CGATGCTGGC CAAGTCCGCC
GCGAAGGTCC CGACCGGCGA CTACCTGTAC GAGCCCAAGT GGGACGGCTT CCGCTGCATC
GTCTTCCGCG ACGGCGACCG GGTCGTGCTC GGCAGCCGCG GCGGCAAGGA GCTGGGGCGC
TACTTCCCGG AGCTCGTCGA GTCTTTGAAG GAAGCGCTGC CGGCGCGCTG CGTCGTGGAC
GGCGAGATCG TGGTGGTCGT GGACAGCCGC CTGGACTTCG ACCGGCTCAG CGACCGCATC
CACCCCGCCG CCTCCCGGGT GAAGCTGCTC GCCGAGCGCA CCCCGGCCTC CTTCATCGGC
TTCGACCTGC TCGCGTTGGG CGACCGCGAC CTGACCGCCG AGCCCTTCGC CGACCGCCGC
GCCGCGTTGC TCAGCGCCGT CGCCAAGCAC GAGTACGTGC ACGTCACCCG CGCCACCGAC
GACCCGGAGC TGGCCGCGAC CTGGTTCCAG CACTTCGAGG GCGCCGGCCT GGACGGCGTC
GTCGCGAAGC CCTCGCAGGG TGCGTACACC CCCGGCGAGC GCAGCATGGT GAAGATCAAG
CACGAGCGCA CCGCCGACGT GGTCGTCGCC GGCTACCGCC TGCACAAAAC CGGCCCGATC
GTCGGCTCCC TGATGCTCGG TCTCTACGGC GAGGACGGCA TCCTGAACTA CGTCGGCGGC
TCCAGCGCCT TCACCATGGC GCGCCGCAAG GAGCTGATCG ACGAACTGGC GCCGTACCTG
CTGCCCGAAG GCGAGTCGCA CCCCTGGGTC GACGCCCCCG ACGAAGGCGA CGGCGACAGT
GGCAGCGGCA GCGGCAGTGA CAGCGAGCAC CGCCGCCCCG GAACCCTGAA CCGCTGGAAC
GCCGGCAAGG ACGTCTCGTT CATCGCCCTG CGCCCCGAGC TGGTCTGCGA AGTGCGCTAC
GACCAGCTGC AGGGCGACCG GTTCCGGCAC AACGGACGCT TCGTGCGATG GCGGCCGGAC
CGCGATGCCG CGTCGTGCTC CTACGAGCAG CTGGACGTGC CGGCCGCCTA TGACCTGGCA
GATGTCTTCG GCGACGCCGG GCAGGACTGA
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| Protein sequence | MAEVNLPVLP PVEPMLAKSA AKVPTGDYLY EPKWDGFRCI VFRDGDRVVL GSRGGKELGR
YFPELVESLK EALPARCVVD GEIVVVVDSR LDFDRLSDRI HPAASRVKLL AERTPASFIG
FDLLALGDRD LTAEPFADRR AALLSAVAKH EYVHVTRATD DPELAATWFQ HFEGAGLDGV
VAKPSQGAYT PGERSMVKIK HERTADVVVA GYRLHKTGPI VGSLMLGLYG EDGILNYVGG
SSAFTMARRK ELIDELAPYL LPEGESHPWV DAPDEGDGDS GSGSGSDSEH RRPGTLNRWN
AGKDVSFIAL RPELVCEVRY DQLQGDRFRH NGRFVRWRPD RDAASCSYEQ LDVPAAYDLA
DVFGDAGQD
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