Gene Caci_5773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5773 
Symbol 
ID8337134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6672606 
End bp6673244 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID644958877 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003116472 
Protein GI256394908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.685616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC ATCAGCGCGA TGCCGTGGCC ACGCGCGAAG CCATCCTCGC CGCCGCCGTG 
GTGGAGTTCA CCGCGCACGG GTACGCCGGT GCCGGGGTTC GGCAGATCGC TGAGCGCGCG
GGCGTGACGG CGATGATGAT CAATCGGTAC TTCGGGTCGA AGCAGGGGTT GTTCGCCGAG
GCGGTCGACC GCTCCTTCGG GCCGGCGACG GTTGTCGGCT CCGAGCGCAG AGGGCTGATG
CGGGACATGG CTCGTGCGCT CGCCGAGCGC ACCGCGCCTG GCGCCGAGGG GTTGGATCCG
TTTTTGCTGA TGCTCCGGTG CGCCTCGGAT CCGGAGGCGG TGGAGATCGT GCGGCGAGGT
GTCGAGGCGC ACGCCGGGGC GCGACTGGCC GGGCTGATCG GCGGGGACGA GGCGGATGTG
CGCGCTCAGC TCGGGCTCGC GCTCGTCGCG GGGACGTGGC TGATGCGGGT GGTGGTCGGG
ACCGGTGCGC TGGCCGCGGC CGATGACGCC CGGCTCGCCG AGCTGCTGGG CGCGATGCTC
GCACCGCTGA CGCAGGAGGC TGACACCCGG CGCGCTGGCG ACGCGGACGC TGACGCGACC
GATGCCGATG CCGATGCCGA TGCCGATGCC GTGACCTAA
 
Protein sequence
MTAHQRDAVA TREAILAAAV VEFTAHGYAG AGVRQIAERA GVTAMMINRY FGSKQGLFAE 
AVDRSFGPAT VVGSERRGLM RDMARALAER TAPGAEGLDP FLLMLRCASD PEAVEIVRRG
VEAHAGARLA GLIGGDEADV RAQLGLALVA GTWLMRVVVG TGALAAADDA RLAELLGAML
APLTQEADTR RAGDADADAT DADADADADA VT