| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5192 |
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| Symbol | |
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| ID | 8336546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5967887 |
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| End bp | 5968528 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958290 |
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| Product | peptide deformylase |
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| Protein accession | YP_003115892 |
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| Protein GI | 256394328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0341702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACT CCGACTCCGG CACCGCCAGG CCCATCACGA TCGTCGGCGA CCCGGTGCTG
CACCGCCCGT GCGCCCCGGT GGAGGAGTTC GACGACCGGC TGGCCGGGCT CGTGGCCGAC
ATGTTCGCCT CGATGTACGC CGCCGAGGGC GTGGGGCTGG CCGCCAACCA GATCGGCGTG
CCGCTGCGGG TGTTCGTCTA CGACTGCCAG GACGACGACG GCGTCGAGCA CGTCGGCCAC
GTCGTGAACC CGGTCCTGGC CGAGCAGCCG CCCGACCGGC GCCAGCTCGA CGACTCCGCC
GAGGGCTGCC TGTCGGTGCC CGGGCCGCAC CATGAGCTGG CGCGCCCGGA CTACGCGCGG
GTGACCGGCG TGGACCTGCA CGGCGAGCCG ATCACCGTGG AGGGCACCGG CTACTTCGCC
CGCTGCCTCC AGCACGAGTT CGACCACCTC GAGGGCCGGC TCTACATCGA CCGGCTGAGC
AAGCGCCAGC GCAAGAACGT GCTGGCCGAG ATGGAGCGGA TGCAGGAGGA GAAGGCGAAG
AGAGCGGCGG AGCCCACGGA GACGAAGGAA GCGAAGGAAG CGAAGGAAGC GAAGGAAACG
AAGACCGCGG GCACGGGGAA GTCGTCCGCA CCGGCGAACT AA
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| Protein sequence | MSDSDSGTAR PITIVGDPVL HRPCAPVEEF DDRLAGLVAD MFASMYAAEG VGLAANQIGV
PLRVFVYDCQ DDDGVEHVGH VVNPVLAEQP PDRRQLDDSA EGCLSVPGPH HELARPDYAR
VTGVDLHGEP ITVEGTGYFA RCLQHEFDHL EGRLYIDRLS KRQRKNVLAE MERMQEEKAK
RAAEPTETKE AKEAKEAKET KTAGTGKSSA PAN
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