| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4583 |
|---|
| Symbol | |
|---|
| ID | 8335937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5215482 |
|---|
| End bp | 5216144 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644957684 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003115286 |
|---|
| Protein GI | 256393722 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.130075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACT ACTGGAACCA CAACGTCGCG CACCACGCGC GCATCGTGCG CGCGATGCCG
CCGAACTGCC GCTCGGCGCT GGACGTCGGC TGCGGCGACG GCCTGCTCGC GCAGAAGCTG
GCCACGCGCG CGAACTGGGT CGTGGCCCTG GACGCATCGG CGGACATGGC CGAACAAGCC
CGCCGCCGCA CCGCCGAACT GGACGTCGAG GTGGTCGAAG CCGACTTCCT CGCGGCAGTC
CGCGACGGCG TCCTCCCCCG CCACTCCTTC GGCTTCGTCA CCTCGGTCGC CGTCCTGCAC
CACCTCGACC CCGAAGCCGC GCTCCAGGCC ATGGCATCGC TCCTGGAACC GGGAGGCCGC
CTGGCCGTGG CCGGACTGGC GATGAGCCGA TCGGCCGTGG ACTGGCTGAT CGCCGCCGCC
CAGCTGCCGA TAGTGCAGAC CATACGACTG GCCCACGGCG GCAAATCAGG CCCGGACGGC
ATGCCGATGA ACTTCGACGA CATCCCATCC TGGGCCCAGT CCAAGCGCAC AGCGCTCGAC
ACCCTGCCCG GCGCACGCTG GCACCGGACA CTCCAGCTGC GCTACATGAT CGAGTGGACC
GCGCCCGGAG CAGAACGCCG AGCGGGTCAG CGCCGCGCGT CAGTGCCAGT GGAACGCACC
TGA
|
|---|
| Protein sequence | MTDYWNHNVA HHARIVRAMP PNCRSALDVG CGDGLLAQKL ATRANWVVAL DASADMAEQA
RRRTAELDVE VVEADFLAAV RDGVLPRHSF GFVTSVAVLH HLDPEAALQA MASLLEPGGR
LAVAGLAMSR SAVDWLIAAA QLPIVQTIRL AHGGKSGPDG MPMNFDDIPS WAQSKRTALD
TLPGARWHRT LQLRYMIEWT APGAERRAGQ RRASVPVERT
|
|---|
| |