Gene Caci_4349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4349 
Symbol 
ID8335703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4937913 
End bp4938371 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID644957452 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003115054 
Protein GI256393490 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0499883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.877565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGC TCGATGCGGA GATCGTCCGC CTTCTGCAAG CCGACGCCCG GCAGTCGAAC 
CGCGAACTGG CTCGGACGCT CGGCGTCGCG CCCTCGACGT GCCTGGAGCG GGTCAGGTCC
CTGACCCGGC GCGGGGTGAT CCGCGGCTAC CACGCCGAGA TCGACACCGC CGCCCTCAAC
CGCGGGGTCC AGGCGCTGGT CGCGGTGCAG ATCAGGCCGC TGAGCCGCAG CGTGATCGAC
GCGTTCTCCG ACTTCGCCTC GGCGCTGCCG GAGGTGCTCA GCACGTTCGT GCTCTCCGGC
GGCGACGACT TCGTGCTCCA CGTCGGCGTC CCGGACCTGG ACCGCCTGCA CATGTTCCTG
ACCGACCGGC TCGCCAAGCG CCGCGAGGTC ACCGGCTTCC GCACCTCGGT GATCTTCAAG
CAGGTCCACC AGGCGGTGCC GGAGCGCCTG CCGGACTGA
 
Protein sequence
MDQLDAEIVR LLQADARQSN RELARTLGVA PSTCLERVRS LTRRGVIRGY HAEIDTAALN 
RGVQALVAVQ IRPLSRSVID AFSDFASALP EVLSTFVLSG GDDFVLHVGV PDLDRLHMFL
TDRLAKRREV TGFRTSVIFK QVHQAVPERL PD