| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3616 |
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| Symbol | |
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| ID | 8334969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4043771 |
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| End bp | 4046542 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956757 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003114360 |
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| Protein GI | 256392796 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT ACTTCCCGGC CGGAATCCGA TCCCGCCGGG TTCCGCTTAT TGGCCGAGGT
GATGAGCAGC GGGCGCTGAC CGAGCTGGTG GCGGATGTTC GGGACGGGAT GAGTTCCGCG
CTGGTGCTGG TCGGTGAGGC GGGTATCGGG AAGACCAGGC TGCTGGATCA TGTCGCTGAG
GTGGCGTCTG ACCTGCACAT CGTGCGGGTG GCCGGGGTGG AGACCGAGGC GCGGTTGGGC
TTTGCGGCGC TGCACAGCTT GCTGCGTCCG TTCCTGGGCG GGCTCGGGGA GCTGCCGACG
CCGCAGCGGG AGGCGCTCGC CTCGGCGTTC GGGATGCTCG CCGGGCCGCC GGCTGACCGC
CATCTTGTCG GCATGGCGGC GCTGGCTTTG CTGGCCGGCG GGGCTTCGGT GCGGCCGGTG
CTGTGTCTGA TCGACGACGC GCACTGGCTC GACCGTGAGT CGCGGGACGC GCTGGCGTTC
GTCGGGCGCC GCCTGGGTGC CGACGCGATC GGCTTCGTCG TCGCCGACCG GGAGCCGGTG
CCGGGGGCTT TCGAAGGTCT GACCGTCATG CCGGTCGGCG GTCTGAGCGA TACCGACGCG
CACGAGCTGC TCGGGCTGAA CGTCGCCGGG CGACTGGATC CGGCGGTGGC CGCGCGCATC
GTCGCCGACA CCGGCGGGAA CCCGCTGGCC CTGCTCGAGA GCATCGGTGC GCTCAGCCTG
GCCTGTCTGG CCGGGACCGC GCCGCTGCTC GGGCCGCTGC CGGTCGGGTC GAGCCTGGAG
AACTACTTCG GTCAACTGAT CCAAGGGCTG CCTGACGACA CGCGCACCTT CTTGGTGTTG
CTGTCGGCCA CGCCGCCGGA GGACGCGCTG CTGCTGTGGC GTGCCGCCGG CGAACTCGGC
ATCGCCGCCG AGGCTGTCGA CGCGGCGATG TCGGCGGGCA TCATCGCCCG CGGCCGGCTC
GTGGAGTTCC GCCATCCGCT GATCCGCTCG GCCGTGTACC GCGGAGCCGA CGCCGCCGAG
CGCCGCCGCG TCCACGCCGC GCTCGCCGCG GCCAGCGATC CGGTCCACAG CCGTGAGCGC
CGCGCCTGGC ACCGCGCCGA GGCGACGATC GGGCTCGATG ACGAGGTGGC CGACGAGCTC
GACTCTGCCT CAGAGCTCGC GCGCGCCCGA GGCGGCTACG CCGAGCGGGC CGCGCTGCTG
GCCAAGGCGG CGCAGCTGTC GGTCGGCGAC CGGGTGCTCC GGTTCGTCGA AGCCGCCCGG
GCGCACCTGC TGCTCGGGGA CCCGGCCGCC GCGCAGTCCC TGCTGCAGCA GGCCGAGCCG
GTCCTCGCCG GCGCCGACCC GGTGCTGCGC GCCCGGGCCC TGCACGCCAA GGCGACGACC
GAGATCTACT TCGAGCGGAT CGGCGGGGTG CTGACCCGGC TGCTGACCGC TGCCGACACC
GTTGCCGACG CCGATCCCGC CCTGTCCCGG TCGATCCTGA TGGAAGGGCT TCTCGGCGCC
TTGTGCGGCG ACCTCGATCC CGTCGCGCTC CAGCAATTCG GCGCCTCGGT CTTGACCTCC
CCGGCGATCC GGTCGGTCCA GCCGACCAGT GCAGATCTGC TCCTGCGTGG CTTTGCTCTG
CGCGTGGACG GCGACTATCC GCAGGCGGCA CCGGTGCTCC GGGCGGCACT CGCCGCGATG
AGCCGGGACA GCGAGGTGAT CGAACACGCC GTCCGTCCGG CGACGCTGGC GCTGTACGCC
GCTGACGAAG TCTGGGACGA CCGCGGCGGC AATGAGGCCG CCCTGCTCGT CGAGGCGCAC
GAACGCCGCG TCGGCGCCCT GGGAGCGCTG CGGTCCACGC TGGTGGTGCG CTCCACGTGG
GAGCTGCGAG CCGGCCGATT CGCCGCGGCC ATGGCGTGCC TGGACGAGTC CGAGGATCTC
GCGACCGTCG TCGGACTGCC GTCGCCGGGC CAGCTGCTGC GCGTCGAGCT GCTGGCGTGG
AGCGGTCAGG AGGCGAAGAC CCGGGCTGTG GCGGACGCGC TGATCGGCGA CCTGGCGACG
CGCCACGCGA ACAGCGGCCT CGCGGACTGG GCCCGGAACT GCCTTGCTGT GCTGGACATC
AGCCTCGGGC GCTACGCCGA GGCCGTGGCC AACGCCCGCG TGGCCTTCGA CACCGACAAC
GCCGGAGCCG TGTCCCGCGT GCTGCCGGAC CTCGTCGAGG CCGCGGTGCG CTGCGGCGAC
GAGCAGACCG CGAAGGACGC GCTTCGCCGG CTGGAGCAGC GTGCCCTGCC GGCCGGCACG
CCCTGGGCCC TGGGCCTGCT GGCGCGAAGC AGGGCCCTGC TGGCCGATGA CGACCACGCC
GAAGCCTTGT TCGCCGAGTC CGTCGCACTG CTCGGCAGTA CCCGAGTACG AACAGAGCTG
GCGCGGACCC ATCTGCTCCA CGGCGAGTGG CTCCGTCGGC GCCGCCGCCG CGCCGACGCC
CGGACCGAGC TGCGCACCGC GTATGAGATG TTCGACCAGA TGGGTGCGGC GGGCTTCGCC
GAACGAGCCC GGGTCGAGCT TCAGGCGACC GGTGAGCACG CCCGGAAGCG CGCCGGCCAG
ACGGGGCAGA GCGCGCACGA TCTGACACCG CAGGAACGGC GGATCGCCGG GCTGGCAGCC
GCGGGGGCGA CGAACGCCGA GATCGCGACG CGCTTGTTCA TCACGCAGTC GACCGTCGAG
TACCACGTCA ACAAGGTGTT CCGGAAGCTG GACATCACCT CGCGGCGACA GCTGCGATCC
GTCCTGCAGT GA
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| Protein sequence | MAEYFPAGIR SRRVPLIGRG DEQRALTELV ADVRDGMSSA LVLVGEAGIG KTRLLDHVAE
VASDLHIVRV AGVETEARLG FAALHSLLRP FLGGLGELPT PQREALASAF GMLAGPPADR
HLVGMAALAL LAGGASVRPV LCLIDDAHWL DRESRDALAF VGRRLGADAI GFVVADREPV
PGAFEGLTVM PVGGLSDTDA HELLGLNVAG RLDPAVAARI VADTGGNPLA LLESIGALSL
ACLAGTAPLL GPLPVGSSLE NYFGQLIQGL PDDTRTFLVL LSATPPEDAL LLWRAAGELG
IAAEAVDAAM SAGIIARGRL VEFRHPLIRS AVYRGADAAE RRRVHAALAA ASDPVHSRER
RAWHRAEATI GLDDEVADEL DSASELARAR GGYAERAALL AKAAQLSVGD RVLRFVEAAR
AHLLLGDPAA AQSLLQQAEP VLAGADPVLR ARALHAKATT EIYFERIGGV LTRLLTAADT
VADADPALSR SILMEGLLGA LCGDLDPVAL QQFGASVLTS PAIRSVQPTS ADLLLRGFAL
RVDGDYPQAA PVLRAALAAM SRDSEVIEHA VRPATLALYA ADEVWDDRGG NEAALLVEAH
ERRVGALGAL RSTLVVRSTW ELRAGRFAAA MACLDESEDL ATVVGLPSPG QLLRVELLAW
SGQEAKTRAV ADALIGDLAT RHANSGLADW ARNCLAVLDI SLGRYAEAVA NARVAFDTDN
AGAVSRVLPD LVEAAVRCGD EQTAKDALRR LEQRALPAGT PWALGLLARS RALLADDDHA
EALFAESVAL LGSTRVRTEL ARTHLLHGEW LRRRRRRADA RTELRTAYEM FDQMGAAGFA
ERARVELQAT GEHARKRAGQ TGQSAHDLTP QERRIAGLAA AGATNAEIAT RLFITQSTVE
YHVNKVFRKL DITSRRQLRS VLQ
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