Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2808 |
Symbol | |
ID | 8334157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3221326 |
End bp | 3222156 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644955954 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003113560 |
Protein GI | 256391996 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.44001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.316047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACG CGCTGACCAT CGGCGACTTC TCCAAGGCCA CGCACCTGAG CGTCCGGACG CTCAGGCATT ATCACCAGAT CGGCCTCCTG GAGCCGGCCG ACGTCGACCC GGACACCGGC TACCGCCGCT ACGCGGCCGT GCAGATCCCC GCAGCCCAGG TGATCCGCCG ATTCCGGGCC CTGGACATGC CGCTGGACGA CATCCACGCC GTGCTGTCCG CACCCGACCT GCGGTCCCGT GACCAGCTCA TCGCGGCCCA CCTAGCCCGG ATGGAGGCCG GCCTGGCCCG GACGCAGCAG GCCGTCGCCT CCCTGCGTGA CCTGCTCGAA CACGGGCCCG CGCCGGCCAC GATCGGGCAC CGGATCGCGA CGGCGACGCC CGCCGCGGCG ATCAGCGCGC AGGTCGGCGT CGCCGACGTG CTGGAGTGGT ACCAGGGAGC CCTGGGAGAG CTCCGCGCGA CCTTGACCGC GCAGGGGCTC CGGCCGGACG GCCCGCCCGG CGGAATGTTC GCCGATGAAC TGTTCGCCCA GGAGTACGGT CGGGCGACCG TCTTCTTCGC CTGCCACGGC CGGATCCGGC CGATGGGCCG GGTCACCGCG ACCACCGTGC CGGCCGCCGA CCTCGCCACC ATCGTCCACG CCGGTCCGCA CGACGAGATC GACCGCGCCT ACGGGACACT CGCCGCCCAC GTCGCCGACC ACGAGGTGGC GGTCGACGGG CCCCTGCGCG AGTACTACCT CGTCGGCTCG GGCGACACCG CCGACGCGGC GGCGTGGCGG ACCGAGATCG GCTGGCCGGT GTTCGCCACC GGGACCAGCG CGCCGGCCTG A
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Protein sequence | MSHALTIGDF SKATHLSVRT LRHYHQIGLL EPADVDPDTG YRRYAAVQIP AAQVIRRFRA LDMPLDDIHA VLSAPDLRSR DQLIAAHLAR MEAGLARTQQ AVASLRDLLE HGPAPATIGH RIATATPAAA ISAQVGVADV LEWYQGALGE LRATLTAQGL RPDGPPGGMF ADELFAQEYG RATVFFACHG RIRPMGRVTA TTVPAADLAT IVHAGPHDEI DRAYGTLAAH VADHEVAVDG PLREYYLVGS GDTADAAAWR TEIGWPVFAT GTSAPA
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