Gene Caci_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2808 
Symbol 
ID8334157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3221326 
End bp3222156 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content74% 
IMG OID644955954 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003113560 
Protein GI256391996 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.44001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.316047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG CGCTGACCAT CGGCGACTTC TCCAAGGCCA CGCACCTGAG CGTCCGGACG 
CTCAGGCATT ATCACCAGAT CGGCCTCCTG GAGCCGGCCG ACGTCGACCC GGACACCGGC
TACCGCCGCT ACGCGGCCGT GCAGATCCCC GCAGCCCAGG TGATCCGCCG ATTCCGGGCC
CTGGACATGC CGCTGGACGA CATCCACGCC GTGCTGTCCG CACCCGACCT GCGGTCCCGT
GACCAGCTCA TCGCGGCCCA CCTAGCCCGG ATGGAGGCCG GCCTGGCCCG GACGCAGCAG
GCCGTCGCCT CCCTGCGTGA CCTGCTCGAA CACGGGCCCG CGCCGGCCAC GATCGGGCAC
CGGATCGCGA CGGCGACGCC CGCCGCGGCG ATCAGCGCGC AGGTCGGCGT CGCCGACGTG
CTGGAGTGGT ACCAGGGAGC CCTGGGAGAG CTCCGCGCGA CCTTGACCGC GCAGGGGCTC
CGGCCGGACG GCCCGCCCGG CGGAATGTTC GCCGATGAAC TGTTCGCCCA GGAGTACGGT
CGGGCGACCG TCTTCTTCGC CTGCCACGGC CGGATCCGGC CGATGGGCCG GGTCACCGCG
ACCACCGTGC CGGCCGCCGA CCTCGCCACC ATCGTCCACG CCGGTCCGCA CGACGAGATC
GACCGCGCCT ACGGGACACT CGCCGCCCAC GTCGCCGACC ACGAGGTGGC GGTCGACGGG
CCCCTGCGCG AGTACTACCT CGTCGGCTCG GGCGACACCG CCGACGCGGC GGCGTGGCGG
ACCGAGATCG GCTGGCCGGT GTTCGCCACC GGGACCAGCG CGCCGGCCTG A
 
Protein sequence
MSHALTIGDF SKATHLSVRT LRHYHQIGLL EPADVDPDTG YRRYAAVQIP AAQVIRRFRA 
LDMPLDDIHA VLSAPDLRSR DQLIAAHLAR MEAGLARTQQ AVASLRDLLE HGPAPATIGH
RIATATPAAA ISAQVGVADV LEWYQGALGE LRATLTAQGL RPDGPPGGMF ADELFAQEYG
RATVFFACHG RIRPMGRVTA TTVPAADLAT IVHAGPHDEI DRAYGTLAAH VADHEVAVDG
PLREYYLVGS GDTADAAAWR TEIGWPVFAT GTSAPA