| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2724 |
|---|
| Symbol | |
|---|
| ID | 8334073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3119401 |
|---|
| End bp | 3120921 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644955874 |
|---|
| Product | tryptophan halogenase |
|---|
| Protein accession | YP_003113480 |
|---|
| Protein GI | 256391916 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.656683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGCT CTGACAGAAG GATCCTGACA AAAAGGATGG TGTTTTCGGA GATGACCGAG
GTAATCGTCG TCGGCGGCGG TCCGGCCGGA TCGACCGCAG CCGCCCTACT GGCCAAGAAC
GGAGTTTCGG TCACGCTCCT GGAACGCGAG GCGTTCCCCC GCTACCACGT CGGCGAGTCG
ATCACGTACT CGTGCCGGGG CGTGCTGGAC TACATCGGCG CGCTGGAGAA GATCGAAGCC
CGCGGCTACA CCCGCAAGAC CGGCGTGCTG CTGCGCTGGG GACAGGAGCT GGACTGGGCG
ATCGACTGGA CCGCGCAGTT CGGGCCGGAC GTGCGCTCCT GGCAGGTGGA CCGGGAGGAC
TTCGACCAGG TGCTGCTGCA GCACGCGGCC GAGTGCGGCG CCCAGGTCCT GGAGCAGGCG
CAGGTCAAGC GGGTGGTGTT CGAGGACGGC CGCGCCGTCG GCGTCGAGTG GACGCCCCAG
GGCCACAGCG AGCCGCAGAT CACCCGCGCG GACCTGGTCC TCGACGCCTC GGGCCGGGCC
GGTCTGATCA GCGCCCAGCA CTTCCGCGAC CGCCGCGCCA CCGAGATCTT CCGCAACGTC
GCGATCTGGG GCTACTGGGA CGGCGGCGAG CTGCTGCCGG ACAGTCCGTC CGGGAGCATC
AACGTCATCT CCTCGCCCGA GGGCTGGTAC TGGGTCATCC CGCTGAGCGG GAACCGGTTC
AGCGTCGGCT ACGTCACGCA CAAATCAGTG TTCGTCGAGC GGCGCAAGGA CTACGACACC
CTGGACGACA TGCTCGCGGC GGTGGTTGCC GAGTCGCCGA CGGTGAGCGA GGCGATGGCC
AAGGGCACGG TCCGCCCGGG CGCCCGGGTC GAGCAGGACT TCTCCTACGC GGCCGACAGC
TTCTGCGGCC CGGGCCACTT CCTGGTCGGC GACGCGGCCT GCTTCCTGGA CCCGCTGCTG
TCCACCGGCG TGCACCTGGC CATCTACAGC GGACTGCTCG CGGCCGCCTC GGTGCTCTCG
ATCGAGAACG GCGACGTCAC CGAGACCGAG GCCTACGCGT TCTACGAGTC CCGCTACCGC
AACTCCTACG AGCGGCTGTT CACGCTGGTC GCGGGCTTCT ACCAGAAGCA CGCCGGCAAG
GACCGCTACT TCGAGCTGGC CAAGGCCCTG ACCCGGGAGC ACAAGGGGCT GGAGGGCAGC
GCCGACCTGG CGTTCGGCGA GATCACCTCC GGCATCACCG ACCTGCGCGA GGCCAAGGAC
GACAGCGGGC TCGGCGACCG GCCGATCCGC GAGTCCGTCG CCGAGGCGGC CTCCCGGCGC
TCGAAGGTCC AGGACCTGCT CAGCGCGACC GAGCAGGCGC AGCAGCGGGC CGAGGCCGGG
CTGCCCAACA CCGGCGGCGA CCGCGGCCGC TCGCGGGTGC AGATCGACGC CGACGACCTC
TACGACGCCG CGACCGGGCT GCACCTGGTC ATGGAACCGC GGCTGGGGAT CCAGCGGGCG
GCGGTGCCGG CGGCCGGCTG A
|
|---|
| Protein sequence | MSRSDRRILT KRMVFSEMTE VIVVGGGPAG STAAALLAKN GVSVTLLERE AFPRYHVGES
ITYSCRGVLD YIGALEKIEA RGYTRKTGVL LRWGQELDWA IDWTAQFGPD VRSWQVDRED
FDQVLLQHAA ECGAQVLEQA QVKRVVFEDG RAVGVEWTPQ GHSEPQITRA DLVLDASGRA
GLISAQHFRD RRATEIFRNV AIWGYWDGGE LLPDSPSGSI NVISSPEGWY WVIPLSGNRF
SVGYVTHKSV FVERRKDYDT LDDMLAAVVA ESPTVSEAMA KGTVRPGARV EQDFSYAADS
FCGPGHFLVG DAACFLDPLL STGVHLAIYS GLLAAASVLS IENGDVTETE AYAFYESRYR
NSYERLFTLV AGFYQKHAGK DRYFELAKAL TREHKGLEGS ADLAFGEITS GITDLREAKD
DSGLGDRPIR ESVAEAASRR SKVQDLLSAT EQAQQRAEAG LPNTGGDRGR SRVQIDADDL
YDAATGLHLV MEPRLGIQRA AVPAAG
|
|---|
| |