| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2254 |
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| Symbol | |
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| ID | 8333603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2557924 |
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| End bp | 2559222 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644955407 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003113013 |
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| Protein GI | 256391449 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.534892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00235651 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAGGA CCACAGCGAT ATCCGCCATA GCCGTCGCCG CTACGCTGCT GGCCGGCTGC
GGCGTCGGAA GCAAGTCCTC GTCGTCGGAC GCGAACAAGA CCGTCTCCAC CACGGCGGCG
CTGTCGGGCA CCATCACCTT CCAGACCTGG TCGCTGAAGA ACGACAAGTT CACCCCGTAC
TTCACGAAGC TGATCGCCGA CTTCAAGACG GCGCACCCGG GCACCGAGGT CAACTGGATC
GACCAGCCCG GCGACGGCTA CCCGACCAAG GTCACCAGCC AGGTCTCCAC CGGCAGCCTG
CCGGACGTGA TCAACCTGCC GCCGGACATC GCGCACGCGG TGGCCAAGAC CGGCAACCTG
CTGGACCTGA AGCAGAACGT GCCGACGCTG CAGACGGACT ACGTCAAGAG CGGTCTGAGC
GCCTACAACT ACCAGGACAT CTCCGGCGGC TCCCAGTTCT TCGGCTTCCC CTGGTACCTC
GGTACCGACG TGAGCTACTG GAACAAGACG ATGATGGCCA AGGACGGCCT GGACGCGGCC
AACCCGCCGA AGACGTTCGA CGACCTGGTC GCCCAGGCGA AGATCATGCA CGACAAGTCC
GGCGGCAAGG ACTACCTGAT GTCCCGCGCC CCGGGGCTGT CGGACATCGC GAACACCGGC
ACCAAGCTGC TGTCCGCCGA CGGCACGAAG TTCGCCTTCA ACACCTCGCA GGCCGAGGCG
ATGCTGGACA AGTACACCGC CGCCTACAAG GCCGGGTACC TCCCCTCGAA CGTGCTGGAC
AACAGCTACG AGGGCAACTC CACGCTGTTC AGCAAGCAGC AGGTCGCCTG GACCACCGGC
GGCGGCAACC TGATCACCAG CCTGCAGCAG GACAACCCGA CGCTGGCGCC GAACGTGGTC
CCCTCCCCGG CGCTGGACAC CGCGCCGCTG TACGTGCAGG GCCTGTCGGT CTCCAGCAAG
AGCAAGAACC TCCCGCTGGC GGTGGCCTTC GCCGAGTTCG TGACGGACAA CGAGAACCAG
GCCGGCTTCG TCAAGCTGGC GCCGGGCTTC CTGCCGGGCT CCGCGGCCTC CGCGAACGAC
CCGCAGTACA GCAAGAGCGA CGGCACCACG CAGGGCGACG CCTCGGTGAT CGCCTACAAG
GACATGCAGA CCGCGGTGAA CTTCACCCCG CCGATCTGGA CCGACGCGAT GAACACGCTC
CTGAACCAGG AGATCGCCAA GGCGATGACC GGCAAGGAGA CCTCCAAGCA GGCCTTGGAC
AACACGGTGA ACCAGGCGAA CGCACTGCTC TCGCAGTGA
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| Protein sequence | MRRTTAISAI AVAATLLAGC GVGSKSSSSD ANKTVSTTAA LSGTITFQTW SLKNDKFTPY
FTKLIADFKT AHPGTEVNWI DQPGDGYPTK VTSQVSTGSL PDVINLPPDI AHAVAKTGNL
LDLKQNVPTL QTDYVKSGLS AYNYQDISGG SQFFGFPWYL GTDVSYWNKT MMAKDGLDAA
NPPKTFDDLV AQAKIMHDKS GGKDYLMSRA PGLSDIANTG TKLLSADGTK FAFNTSQAEA
MLDKYTAAYK AGYLPSNVLD NSYEGNSTLF SKQQVAWTTG GGNLITSLQQ DNPTLAPNVV
PSPALDTAPL YVQGLSVSSK SKNLPLAVAF AEFVTDNENQ AGFVKLAPGF LPGSAASAND
PQYSKSDGTT QGDASVIAYK DMQTAVNFTP PIWTDAMNTL LNQEIAKAMT GKETSKQALD
NTVNQANALL SQ
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