Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1993 |
Symbol | |
ID | 8333336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2253853 |
End bp | 2254671 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644955142 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003112754 |
Protein GI | 256391190 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC TCAGCATCGG CGCGTTCGCG CGTCTGACCC GCCTTTCGCC GAAAGCGCTG AGGCTCTACG ACGAACTGGA CCTGCTGCCT CCGGTGCACG TCGATCCGGA CAGCGGCTAC CGCTGGTACT CGCTGGACCA AGCCGGTCGA GCGCGGCTGG TGGGGCAACT GCGCCAGCTC GACATGCCGC TGGCGCGCAT CCGGGCGATC GTCGATCTGC CGGAGGGCGC GGTGGCCGGC GAGCTCGCCG CCTACTGGGC CGGGCAGGAG CAGGGCTGGA AGGCGAAGCA GGAGCTGGTC GGCTACCTCA TCAACCAACT GACAGGCAAG GAGACCACCA TGTATGACGT GTCCGTGCGG ACCATCCCCG CTCGCACTCT GCTGAGCACC AGCGAAACCC TGACCGCAGA CCAGATCGGC GCCTTCGCGA CCCCGCTGTT CATGCTGTTC GGCGGCCCGA CCATCCCGCG TCCCGACGGC GAGGCTGGCC GGCCGTTCCT GCGCTATCAC AGCGAGATCA GCAACGACAG CGAGGGACAG GTCGAATTCT GCTGCCCCGT CAACGCCGCC GACGTCGACC GCATCGCCGA CCTGTACTCC GACATGACGC CGAGCACGGA GGGCGCCGTC CGCGAAGCGT TCATCAGCGT GCCCAAGGCG AACATGATGA CCACGCTCGG CGTCGAGTCG CTGCGGCAAT GGCTCAGCGA CCACCACGAA GAGGCCGTCG ACGGTCCGCG CCAGATCTTC CTGCGCGACC CCGCCACGGC CGAGTCCACG GACGCGGTCT ACGAGCTGGC GGTCGCACTG CGCGACTAG
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Protein sequence | MDLLSIGAFA RLTRLSPKAL RLYDELDLLP PVHVDPDSGY RWYSLDQAGR ARLVGQLRQL DMPLARIRAI VDLPEGAVAG ELAAYWAGQE QGWKAKQELV GYLINQLTGK ETTMYDVSVR TIPARTLLST SETLTADQIG AFATPLFMLF GGPTIPRPDG EAGRPFLRYH SEISNDSEGQ VEFCCPVNAA DVDRIADLYS DMTPSTEGAV REAFISVPKA NMMTTLGVES LRQWLSDHHE EAVDGPRQIF LRDPATAEST DAVYELAVAL RD
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