Gene Caci_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1993 
Symbol 
ID8333336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2253853 
End bp2254671 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID644955142 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003112754 
Protein GI256391190 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGC TCAGCATCGG CGCGTTCGCG CGTCTGACCC GCCTTTCGCC GAAAGCGCTG 
AGGCTCTACG ACGAACTGGA CCTGCTGCCT CCGGTGCACG TCGATCCGGA CAGCGGCTAC
CGCTGGTACT CGCTGGACCA AGCCGGTCGA GCGCGGCTGG TGGGGCAACT GCGCCAGCTC
GACATGCCGC TGGCGCGCAT CCGGGCGATC GTCGATCTGC CGGAGGGCGC GGTGGCCGGC
GAGCTCGCCG CCTACTGGGC CGGGCAGGAG CAGGGCTGGA AGGCGAAGCA GGAGCTGGTC
GGCTACCTCA TCAACCAACT GACAGGCAAG GAGACCACCA TGTATGACGT GTCCGTGCGG
ACCATCCCCG CTCGCACTCT GCTGAGCACC AGCGAAACCC TGACCGCAGA CCAGATCGGC
GCCTTCGCGA CCCCGCTGTT CATGCTGTTC GGCGGCCCGA CCATCCCGCG TCCCGACGGC
GAGGCTGGCC GGCCGTTCCT GCGCTATCAC AGCGAGATCA GCAACGACAG CGAGGGACAG
GTCGAATTCT GCTGCCCCGT CAACGCCGCC GACGTCGACC GCATCGCCGA CCTGTACTCC
GACATGACGC CGAGCACGGA GGGCGCCGTC CGCGAAGCGT TCATCAGCGT GCCCAAGGCG
AACATGATGA CCACGCTCGG CGTCGAGTCG CTGCGGCAAT GGCTCAGCGA CCACCACGAA
GAGGCCGTCG ACGGTCCGCG CCAGATCTTC CTGCGCGACC CCGCCACGGC CGAGTCCACG
GACGCGGTCT ACGAGCTGGC GGTCGCACTG CGCGACTAG
 
Protein sequence
MDLLSIGAFA RLTRLSPKAL RLYDELDLLP PVHVDPDSGY RWYSLDQAGR ARLVGQLRQL 
DMPLARIRAI VDLPEGAVAG ELAAYWAGQE QGWKAKQELV GYLINQLTGK ETTMYDVSVR
TIPARTLLST SETLTADQIG AFATPLFMLF GGPTIPRPDG EAGRPFLRYH SEISNDSEGQ
VEFCCPVNAA DVDRIADLYS DMTPSTEGAV REAFISVPKA NMMTTLGVES LRQWLSDHHE
EAVDGPRQIF LRDPATAEST DAVYELAVAL RD