| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1892 |
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| Symbol | |
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| ID | 8333235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2145939 |
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| End bp | 2148932 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644955041 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003112653 |
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| Protein GI | 256391089 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGT TGGCCGCCGG CGGCGGGGTC CTGGTGAGCG GCCCGGCCGG AATCGGCAAA
TCGGCGTTGC TGGACGCGAT CGGCTCGGCG TGCGCGGCCG CCGGGCAGCT GGTGCTGCGC
AGCGCGTCGG CGGCGGCCGA GTCCTGGCTG CCCTATCTGG GCTTGTACGA CCTGTTCTCC
GACGCCGTCG CCTCCCGGCC CGAAGTCGTG CCCTACCACC TGCGCCCCGC CTTCGACGGC
GTGCTGATGC GCACCGTCCC CGACGGCGCG GCCACCGACC AGCTGGCGAT CCGCGTGGCG
GTGGTCGAGG CGCTGCGCGC GCTGTCCGCC GAACGTCCGG TGCTGCTGAT CCTGGACGAC
GTCAACTGCC TGGACTCGGC CACCGCCGAG GTCCTGGCCT TCGCCGTGCG CCGCCGCCAG
GGCAGCCGCG TCCGGGTCCT GGCCGCCGAG CGGCTGTCGG AGGGACAGGA ACCGACCTGG
TGGGGGCTGC TGCCGGAGGA CGCCGTCGAG ATCGCCCTGG GCAACCTGCC CGGCCCGGTG
GTCTCCGAAC TGCTGCGGAC CCGCCTCGGC CTGCGTCCCA CGGACAAGCT GTCGCAACGG
ATCCGCGACG CCAGCGACGG AAACCCCTTC TACGCCTTGG AATTGGGACG CGCCGCCCTG
CGTTCGGGAA CGGTCGTCCA GCCCGGCGAC CCGCTGCAGG TCCCCGAGCG CCTGCGCGGT
CTGCTCGCCG ACCGCCTGCA CGCCCTGCCG CAGGCCGCCC GCGACGCGCT GCTGCTCATC
TCGACGGCCG CGCGCCCGCC GCGCGAACTG CTCGCCGGCC ACGAATGGGG ACTGTCGCAG
GCGCTGGCCT CCGGCATCAT CGTCTCCGGC CGCGACCTGG AACCGCGCTT CGCACACCCG
CTGCTGCGCG AGATCGTGTA TGCGGACGCT GATTTAGAAG CCCGCCAGGA ATGCCACGCC
AAACTCGCCC ACGCGCACGA CGATCCGCTG GAGCGTGCGC GCCATCACGC TTTGGCGACA
TCGGAGGCCA CCGAGGAGTT GGCCGCGGAG TTGGAGGAAG CGGCGCGGAT CGCGGTGCAC
CGCGGGGCGC CGGGGACGGC CGCGGAGCTG TATCGGATGG CTGCGGAACG GACGCCGACG
GCCGGCGGCG GCCGCGAAAC CTCAACGCAT GCCGACCCTG GCGCGCCAGT GGCGACCGAG
ACCGACACGG TGTCGGTTAC TTCGACGGCG AACGGGTCGT CGGGGGTATC AGGAGTGTCG
GGGGCGGCGG GGATATCGAG GGCGTCGGCG GGCTCGTCGG CGCATCCTTC CGGCTCCGGT
GCGGCGAGCG ATTCCGACGA CCAGCCAGGA GATGCCGGCG ATGCCGGCGG CACCGGCAGC
GCTGACAGCC GCGATCTCGA TGGCTCCTCT GCCGATCTCG GCGACTCTGC CTCCCAGCCC
GGCGCCTCTG CTCCTCGCCT CGGCGACTCC GGCGCGCACC GCCTGCTCGA AGCCGCCCGC
GCCGCCTTCG ACGCCGGGCT GCCGCGCCAG GCGCGCGAGG CCGCCGAAGC GGTCGTGGCG
GGTCCGGACC CGGCGTGCCG CGTCGGCGCG CGCCTGCTCC TGGTCGAGCT CGACGACGAC
ATATCGGTGC AGGCCGCCCT GCTCGAAGCC GCGGAAGCCG ACGCCGCCGG ACGCCCGGAC
CTGCAGGCGC GCGTCAGCCT CCAGCGCGCC GACCACGCCT TCCGCTCCGG CTCCGTCGAG
GCGGCGCTCG CCGCCCTGGC CCGCGCCGAG GAGTACGCCC TCACCACCGG CGACCGCAAT
CTGCGTGCCG AGTCCATAGC GATGCGCGTG CCGACCGAGA TCCAGACCGA CCCCGAGCGC
GCCATCGAGT CGCTGGAGGA GGCCGAGGCC CTCGGCCTGG GCGGGGACCT GACCCTGCCG
TCGATCGCGG TTCGCAAATC CCTGATCATC TGGTTCCTGC GTCGCGGCGA CGTCGCCGAC
GCACTGGCCA CCGCCGCCCG GCTGCGGGCC GACGTCGAGC GCGCCGGCCG GCTGCGCGAC
CTCGGCGACG TGCTGCACTT GGTGGCCTCG GTCAACGAAC GCGCGGGCCT GTGCCGCCAG
GCGCATGAAG CCGCGCTGCT GGGCAGCCGG CTGCGCGCCG AGACCGGTTC CTCCAGCGTG
CAGGCGCTGA TTCTCTCCGC CGCGGCGGAG CTGTCCAACG GCAGTGCGGA GGCTGCCGTG
GACGTCGCTC AGCGCGCCAT CGAGGCCGGC ACCGCCTCCG GCGACTCGGA GTTCACCGGC
TACGCGCACG CCTTCCTGGG CCGCGCCGAA CTGCTTCTGG ACCGCTCCTC GCAGGCCGCG
CACCACCTGG CGCGCGGCAG GACCCTGATG CGCAACGTCG GCATGGTCGA CCCCGCGACG
TTCCTGGTCG ACGCCGACCT CGCCGAGACC CTGGCCCGCT GCGGCTCCTT CGCCGCTGCC
GACCGCATCC TCGACGAGGC GCAGGAAGCC GCGCGGCGTC TGGAACGCGA CGTGGTGAAG
CTCGGCCTGA CCCGGGCCCG CCTCCTGCGC CACGGCCTGG CCGCCGACGC CCGCGAGGCG
GCCGACCGCC TCCGCGCCGC CATCCCCACC GAACACCCCT ATCCGCTGGA GATAGCCCGC
GCCGAGGTCA CCCTCGGCGA GCTGGAACGC CGTGCCCGAC GCCGCGCTGC AGCCCGCACC
GCGTGGGAAT CGGCGGCGAC CTCCTACGCG GCAGCCGGCT GCGGACCCTG GCTGCGCTTC
GTCCAAGGCC GCCTGGCCCG CCTGGACACC CCGGCCGAAC CTCTCAGCGC GACCGAACGC
CAGATCGTGG AACTGGTCCG CTCCGGCGCC ACGAACCGCC AGATAGCAGC CGCCCTCCAG
GTCTCGGTGA AGGCGGTCGA AGGCAACCTG ACCCGCCTGT TCCGCCGCTT CGGCGTCAGC
AGCCGCGCCG AACTCGCCGG CGCCGAACCG GTGGCGCGCG TAGAGCACGT CTGA
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| Protein sequence | MAALAAGGGV LVSGPAGIGK SALLDAIGSA CAAAGQLVLR SASAAAESWL PYLGLYDLFS
DAVASRPEVV PYHLRPAFDG VLMRTVPDGA ATDQLAIRVA VVEALRALSA ERPVLLILDD
VNCLDSATAE VLAFAVRRRQ GSRVRVLAAE RLSEGQEPTW WGLLPEDAVE IALGNLPGPV
VSELLRTRLG LRPTDKLSQR IRDASDGNPF YALELGRAAL RSGTVVQPGD PLQVPERLRG
LLADRLHALP QAARDALLLI STAARPPREL LAGHEWGLSQ ALASGIIVSG RDLEPRFAHP
LLREIVYADA DLEARQECHA KLAHAHDDPL ERARHHALAT SEATEELAAE LEEAARIAVH
RGAPGTAAEL YRMAAERTPT AGGGRETSTH ADPGAPVATE TDTVSVTSTA NGSSGVSGVS
GAAGISRASA GSSAHPSGSG AASDSDDQPG DAGDAGGTGS ADSRDLDGSS ADLGDSASQP
GASAPRLGDS GAHRLLEAAR AAFDAGLPRQ AREAAEAVVA GPDPACRVGA RLLLVELDDD
ISVQAALLEA AEADAAGRPD LQARVSLQRA DHAFRSGSVE AALAALARAE EYALTTGDRN
LRAESIAMRV PTEIQTDPER AIESLEEAEA LGLGGDLTLP SIAVRKSLII WFLRRGDVAD
ALATAARLRA DVERAGRLRD LGDVLHLVAS VNERAGLCRQ AHEAALLGSR LRAETGSSSV
QALILSAAAE LSNGSAEAAV DVAQRAIEAG TASGDSEFTG YAHAFLGRAE LLLDRSSQAA
HHLARGRTLM RNVGMVDPAT FLVDADLAET LARCGSFAAA DRILDEAQEA ARRLERDVVK
LGLTRARLLR HGLAADAREA ADRLRAAIPT EHPYPLEIAR AEVTLGELER RARRRAAART
AWESAATSYA AAGCGPWLRF VQGRLARLDT PAEPLSATER QIVELVRSGA TNRQIAAALQ
VSVKAVEGNL TRLFRRFGVS SRAELAGAEP VARVEHV
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