Gene Caci_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1628 
Symbol 
ID8332971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1850381 
End bp1851658 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content71% 
IMG OID644954778 
Producthistidine kinase 
Protein accessionYP_003112390 
Protein GI256390826 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.827591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAG TCCACGGTAT ACAAGGCGTG ATGGCGGGCA ATTCCGGAGC GGTCGACAGC 
ACCTACGGCG GCGAGGTCGG GCCGGCCGCG GTGCCGCAGG GCGTCCGCCG GCGCGGGCTG
ACCATCCGGC TGCGCATGAC GATCACGTAC GGCGCCTCGG TGTTCGTGAC CGGCGCGGTC
CTGATCTACA CCGCCTACAC GCTGTTCAAG TGGCGGCTCG GACACCCGGT CGCGGACGTC
TCCGAGCCCG CGGACTGCCA GCGGCCCAAG GCGTCGATGA CCCTGGCCGA GACGAAGAAC
TGCAAGGCCA TCGCCGACCA GCAGATCCTG CGCCAGATCG ACAAGCCGCT GATCTTCGTG
CTGCTGATCT CCGCGGTGGT CGCGCTCGTG ATCGGCTACT TCCTGGCCGG CCGGTTCCTG
CACCCGATCA ACCGCATCAC GCGCATGGCG CGGCGCGTGG CCAGCCGCCC GGACCGGAGC
ATGCACGCGC GCATCGACAT GGACGGCCCG CAGGACGAAC TCGTCGAGCT CGCCCAGACC
TTCGACGGCA TGCTGGACCG GCTGGACCAG GCCTTCGAGG GGCAGCGCCG GTTCGTCGGC
AACGCCTCGC ACGAGCTGCG CACGCCGCTG GCGATCAACC GCACGCTGCT CGAAGTGACG
CTGATGGACC CGGAGGCCTC CGAGCAGACC CGGCAGCTGT GCCGCACCCT GCTGGCCACC
AACGAGCGCA GCGAGCGCAT GATCGAGGGC CTGCTGCTGC TGGCCCGGGC GGACAACGAG
CCGGCCCACC GGGAGGACGT CGACCTCGCC GAGGTGGCGT TCCGCTCGGT CACGCAGTGC
GAGCTGGAGG CGGCCGAGCG GCAGGTGGCG ATCCGCACCT CGCTGCAGCA GGTGTCGGTC
TCCGGCGACG GCATCCTCAT CGAGCGCATC GCGATGAACC TGATCCAGAA CGCGCTGCGG
CACAACATCG GCGCCGGCGG CTGGGTCGAC GTGCTCAGCT ACGACCGCTC CACCGACCTG
CCCGGCCACG GCCTGCTGGT GGTCGCCAAC ACCGGTCCGG AGGTCCCGGC GTACGCGGTG
GAGACGCTCT TCGAGCCCTT CAAACGCGGC ACGCAGCCCT CCGGCGCCTC CCCGGCCCGC
GATCCGAAGG ACAAGGGCGT CGGGCTGGGC CTGTCGATCG TGCGCTCCGT GGTGCGCGCG
CACGGCGGCC GGGTCGCCGC CGAGCCGCGG CCCGGCGGCG GGCTGATCGT GCGGGTGTGG
CTGCCGGTCG GCATGTGA
 
Protein sequence
MQEVHGIQGV MAGNSGAVDS TYGGEVGPAA VPQGVRRRGL TIRLRMTITY GASVFVTGAV 
LIYTAYTLFK WRLGHPVADV SEPADCQRPK ASMTLAETKN CKAIADQQIL RQIDKPLIFV
LLISAVVALV IGYFLAGRFL HPINRITRMA RRVASRPDRS MHARIDMDGP QDELVELAQT
FDGMLDRLDQ AFEGQRRFVG NASHELRTPL AINRTLLEVT LMDPEASEQT RQLCRTLLAT
NERSERMIEG LLLLARADNE PAHREDVDLA EVAFRSVTQC ELEAAERQVA IRTSLQQVSV
SGDGILIERI AMNLIQNALR HNIGAGGWVD VLSYDRSTDL PGHGLLVVAN TGPEVPAYAV
ETLFEPFKRG TQPSGASPAR DPKDKGVGLG LSIVRSVVRA HGGRVAAEPR PGGGLIVRVW
LPVGM