Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1263 |
Symbol | |
ID | 8332598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1432080 |
End bp | 1432967 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954410 |
Product | hypothetical protein |
Protein accession | YP_003112029 |
Protein GI | 256390465 |
COG category | [S] Function unknown |
COG ID | [COG3305] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGACT GGAACAGGCG CCATTGTGCG CGTCGGGGGC ATGAAACCTA CGCACCGGTG GGCTCGGGGC TGGAGACCGA GCTGGCGGCG AGACTTCGAG TGGAGACGGT CCACGGACCG GCGTGGCGCT GTCTGCGCTG CGGCGACTTC GTGATCGGTG AGCCCACGAC GGGCAGCGGT CCGGCGGACG AGGCGCCGAT CGTGCCGCGG GGCAAGGCGC TGCGGGACTT GTTCATCCTG CGGCTGCTGG CGGTCGAGCG GGTGATCCGC GGGGTGGTGA TCCTGCTGAT CGCCTGGGCG GTGTGGAAGT TCGGCAGCAG CCAGAACGCG GTGCAGCGGC TCTTCGAGTC GGACCTGTCG GCGTTCAAGC CGTTCGCGAA CCACTTCGGG TGGGACGTGG AGCACGCCAG TATCGTCGAG CGGATCCGCA AGACGTTCGA CTACAAGCCG AAGACGATCC ACACGGTCGC GCTGCTGCTC GGGGGCTACG CGCTGCTGGA GACGGTCGAG GGCGTCGGGC TGTGGCTGGC CAAGCGCTGG GGCGAGTACC TGACGGCGGT CGGCACGTCG ATCTTCCTGC CGCTGGAGAT CTGGGACGGC TACACCAAGA TCCACGAGCA CAAGTCCTAC ATCCTGGCGA TCTGCACCTT CGCGATCAAC GTCGGCGCCG TGGTCTACCT GCTGCTCACC AAGCGCCTGT TCGGCATCCG CGGCGGCGGC GAGGCCTTCG AGGCCGCGAA GCACGCCGAC GCGCTGATGA CCGTGGAGCT CGCGGCGTGC AACCGCGACC TGCCCGAGCC GCGCTCGGCG CTGTCCGAGA CGGTGGTGCT GAACGCGCCG GCGCTGAGCG ATCCGGCGCT GACCGATCCG GCGCCGGGGG CTCCATAG
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Protein sequence | MRDWNRRHCA RRGHETYAPV GSGLETELAA RLRVETVHGP AWRCLRCGDF VIGEPTTGSG PADEAPIVPR GKALRDLFIL RLLAVERVIR GVVILLIAWA VWKFGSSQNA VQRLFESDLS AFKPFANHFG WDVEHASIVE RIRKTFDYKP KTIHTVALLL GGYALLETVE GVGLWLAKRW GEYLTAVGTS IFLPLEIWDG YTKIHEHKSY ILAICTFAIN VGAVVYLLLT KRLFGIRGGG EAFEAAKHAD ALMTVELAAC NRDLPEPRSA LSETVVLNAP ALSDPALTDP APGAP
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