Gene Caci_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1077 
Symbol 
ID8332412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1220518 
End bp1221390 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID644954225 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003111844 
Protein GI256390280 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0749091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.76361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACG GCGTGAACTA CCGATCCGCC CAGGTCGACG GGCTGAAGGT CTTCTACCGC 
GAAGCCGGAC CGGCGGATGC CCCGACCGTT CTGCTGCTCC ACGGCTACCC GAGCGCCGGG
CACATGTTCC GTGACCTGAT CCCGCGGCTC GCCGGCCAGT ACCGGGTCAT TGCTCCGGAC
CTGCCGGGCT TCGGCCAGTC GGACATGCCC GACCACAAGG AGTTCGAGTA CACCTTCGAG
CACATCACCG ACGTCATCGA CCGGTTCACC GAGGAGATCG GTCTCGACCG GTATGCCGTC
TACGTCTTCG ACTATGGCGC GCCGACCGGC TTGCGCCTGG CGGCCCGGCA TCCGGAGCGG
ATCACGGCGA TCATCTCCCA GAACGGCAAT GCCTACGAGG AAGGACTCAG CGACAGCTGG
GCACCGCTGC GCGCCTACTG GCAGGACAAG TCGCAGGCCA ACCGGGACGC GCTGCGCGAG
TTCCTCTCCC CGGAGACGAC CGTGTGGCAG TACACGCACG GCACTCCCGA GTCCGCGACG
GTTTCCCCGG ACGGATACAG CCTCGACAAC TACTACCTCG CGCGCCCCGG CGCCGACGAA
GTCCAGCTGG ACCTGATGGG CGACTACACC AGCAACGTGG AGCTGTACCC GGCCTTCCAC
GAGTACTTCC GCACGCACAC GCCGCCGCTG CTCGCCGTGT GGGGACAGAA CGACCCCTTC
TTCCTGCCGG CCGGCGCCGA AGCCTTCCGC CGCGACAACC CCAACGCGAC CGTGCGCCTG
CTCGACACCG GCCACTTCGC GCTCGAGACC CACGTCGAGG AGATCGCCGA CGCGATTCTC
GAGTTCCTGG GCGGGGTTGA CTATGAGCAC TGA
 
Protein sequence
MSNGVNYRSA QVDGLKVFYR EAGPADAPTV LLLHGYPSAG HMFRDLIPRL AGQYRVIAPD 
LPGFGQSDMP DHKEFEYTFE HITDVIDRFT EEIGLDRYAV YVFDYGAPTG LRLAARHPER
ITAIISQNGN AYEEGLSDSW APLRAYWQDK SQANRDALRE FLSPETTVWQ YTHGTPESAT
VSPDGYSLDN YYLARPGADE VQLDLMGDYT SNVELYPAFH EYFRTHTPPL LAVWGQNDPF
FLPAGAEAFR RDNPNATVRL LDTGHFALET HVEEIADAIL EFLGGVDYEH