| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1068 |
|---|
| Symbol | |
|---|
| ID | 8332403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 1211509 |
|---|
| End bp | 1212045 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644954216 |
|---|
| Product | bifunctional deaminase-reductase domain protein |
|---|
| Protein accession | YP_003111835 |
|---|
| Protein GI | 256390271 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.64062 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGC TCGTCTCGAC CCTGTTCCTG TCCCTCGACG GCGTCGCCGA GGACGCCGAC
AAGTTCATCG TCGGCTGGGA CGACGTGGTG GACGCCCACG GCGAGGCCAT CATCGCCACC
CAGGACGCGG TCATCCTCGG GCGCCGCAGC TATGACGAGT GGTCCGCGTT CTGGCCGGGC
AGCGAGATCG AGCCCTTCGC CACGTTCATC AACACGGTCC CCAAGTACGT CGCGACGTCC
ACGCCGCTGG AGAGCGAGTG GCACAACACG ACGGTGATCG ACGGCGACCT GGTCGAGTTC
GTCCAGGACC TCAAGAACTC CGCCGGAGAG GACATCGGCG TCCACGCCAG CATCAGGCTC
AACCAAGCGC TGCTCGCCGC CGGCGTCGTC GACGAACTGC GCCTGGCGAT CGCCCCGGTG
GTCGCCGGCC ACGGACGCCG GCTCCTGGAC GGACTCCCGC AGATGCGCTT CGAGACGATC
CGCAGCGTCA CGACGCCCAG CGGCTACGTG CTCGCCGACT ATCGCACCGC ACGGTAG
|
|---|
| Protein sequence | MRKLVSTLFL SLDGVAEDAD KFIVGWDDVV DAHGEAIIAT QDAVILGRRS YDEWSAFWPG
SEIEPFATFI NTVPKYVATS TPLESEWHNT TVIDGDLVEF VQDLKNSAGE DIGVHASIRL
NQALLAAGVV DELRLAIAPV VAGHGRRLLD GLPQMRFETI RSVTTPSGYV LADYRTAR
|
|---|
| |