| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0462 |
|---|
| Symbol | |
|---|
| ID | 8331789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 525818 |
|---|
| End bp | 526831 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644953628 |
|---|
| Product | Endo-1,4-beta-xylanase |
|---|
| Protein accession | YP_003111255 |
|---|
| Protein GI | 256389691 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.45181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGCA ATTCACGTCT CCCCGGTGCG CGCCGGAGCC GTCGGCTCCG GATGTTCATC
GGCGTTGTGC TCGCGCTGTT CCTGGGCGCG ATGCTGCCGT CGGTTCCCGC TTCGGCGGCG
ACGAGTATCT GCTCGAACCA GACCGGCACG AACAGCGGTT ACTACTACCA GATGTGGAGT
AGCGGCCAGG GGTCGGCTTG TATCTCGTTG AACTCGGGGA ACAGCTACAG CTCCACCTGG
AGCGGGATCG GTGACTTCGT CGCCGGCGTG GGCTGGAATC CCGGCGACAA GTCGACGAAG
TCGTTCACCG GGAGCCTGAA CGCGAACGGC GGCACCTCGC TCGTCTCGTT GTACGGCTGG
TCGACGAGTC CGCTGGTCGA GTACTACGTC ATGGAGAACT ACGTCGGTTC GCCCCCCACG
GCCGGCACGT ACATGGGACA GGTCACCAGC GATGGTGGGA CGTTCAACAT CTACGAGCAC
CAGCAGGTGA ACCAGCCCTC GATCCAGGGC ACCGCCACCT TCGAGCAGTA CCTGGCGATC
CGGACGTCGC CGGTGTCCAG CGGCACCATC ACCATGTCCA ACTACATCAA CGCGTGGTCC
AGCCACGGGA TGAACCTGGG CACGCTCAAC TACCAGATCC TCGCCACGGA AGCCTGGGGC
GGCGGCAGCG GTAGCTCCAA CGTCTCCGTG AGCTCCGGCG GTGGAGGCGG CGGTGGCGGT
GGCGGAGGCG GCGGAGGAGG TGGCGGCGGC AGTTGTACTG CAACGCTGTC GGCCGGCTCG
CAGGGCAGCA ACTGGTACAA CCTCAACGTC GCCGTCACCG GCTCCAGCAA CTGGACCGTG
ACGATGAACA TGGCCTCGCC CGCCGTCGTC TACAACACCT GGAACGTCAG CGCCACCTGG
CCCAGCCAAT ACGTGATGGT CGCCAAACCC AACGGAAGCG GCAACAACTT CGGCGTGACC
ATCAGTCCAA ACGGCCAATG GACATGGCCA TCAGTGTCCT GTAGTAGCTC ATAG
|
|---|
| Protein sequence | MPGNSRLPGA RRSRRLRMFI GVVLALFLGA MLPSVPASAA TSICSNQTGT NSGYYYQMWS
SGQGSACISL NSGNSYSSTW SGIGDFVAGV GWNPGDKSTK SFTGSLNANG GTSLVSLYGW
STSPLVEYYV MENYVGSPPT AGTYMGQVTS DGGTFNIYEH QQVNQPSIQG TATFEQYLAI
RTSPVSSGTI TMSNYINAWS SHGMNLGTLN YQILATEAWG GGSGSSNVSV SSGGGGGGGG
GGGGGGGGGG SCTATLSAGS QGSNWYNLNV AVTGSSNWTV TMNMASPAVV YNTWNVSATW
PSQYVMVAKP NGSGNNFGVT ISPNGQWTWP SVSCSSS
|
|---|
| |