Gene Caci_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0176 
Symbol 
ID8331502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp188628 
End bp188966 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content65% 
IMG OID644953344 
Productprotein of unknown function DUF1330 
Protein accessionYP_003110972 
Protein GI256389408 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT ACGCACTCGC CCACGTCCGT TCCGTCGAGC TCTGCGCCGA CATCGTGGAG 
TACCTGGAGC GTATCCAGGG CACCATGGAC CCCTTCGGCG GCCGCTTCGC CTTCCACGGG
GGTGAGAAGG AAGTCGTAGA AGGCGCCTGG ACGGGCGACC TCATCCTCAT CGAGTTCCCC
ACCCTGGACG CAGTCCACAG CTGGTGGACA TCGCCGGAAT ACCGGGCCAT CAAAAACCTG
CGGACCGACC ACATGGCGGC CGACATCGTG GTCTTCGACA CCCTGCCGGC GGACTACAAC
GTCGGGGCGA CCGCCGCGAA GCTGGCGAAG CTCCTCTGA
 
Protein sequence
MTAYALAHVR SVELCADIVE YLERIQGTMD PFGGRFAFHG GEKEVVEGAW TGDLILIEFP 
TLDAVHSWWT SPEYRAIKNL RTDHMAADIV VFDTLPADYN VGATAAKLAK LL