Gene Caci_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0078 
Symbol 
ID8331403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp79104 
End bp80204 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content68% 
IMG OID644953245 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003110874 
Protein GI256389310 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGGA CATCGGGGCC ACTCCAGGCG CTGTTTCTGC GGTTCGGACT GCCGGCACCG 
ACCGCTTTCC GGCCTGTCGA CAGCGGACTT CTCAATCGGT CATATCAGAT CACTTCCGCC
GATCGCCGCT ACTTCCTGAA GCACTATCTG CCCTGGCGCG GAATCGGCTC CGGACTCCCG
GACGCGTACG GTCGCAGGCG CTCCGCAGCG CAGACACTCC GGTGGCAACA CGAAGCCGTG
ATCCGATTAC AGGCGGCGGG TCTCCCCGCA GTCGCCCCGC TCAGGGATGT GCACGGCCGT
ACGGTCGCCT ATGTGCGGGG ACGCCCTTTT GCAGTATTCC CCTGGAACGA CGGCGTGCAC
CGTCACGGCA GACATATGCA CGATATCGAC GCGCGCTGCT TGGGCACCAC GCTCGCCGAC
GTCCACACCG GACTGGCGCG CGTTCTCCCC CAAGTCCCGC AGCCGCTGTT CGTCCCCACT
GCCTCCGAGC GCCGCGCCGT CGCCGAGGCC GAGCAGCTGC TCGCGGTGGT CGACAGCGGT
CCGGGCCGGG ACGAGATGGA CTTGCTCTCC GCACACCGAT TACGGGAGCG CTTAGCGCTC
ATCCCCGAAG TCGCGCACCT CCGGCCCGCG CCGGACGCCG TCGCGACTGT CGGCTACATC
CACGGCGACT TCCACGCCGG GAACGTCATG TGGTCGGCCC TGGAGCCCGG AAGCCGGGTG
ACAGCGATCG TCGACTGGGA GAAGACGGCC GTCGCGCCGT GTGGGGACGA AGTAGTGAGC
ACCGCTTTGG TGTTCTTCAC CGGGGACTAC TCAGGTCAGC TCGACCTGGA TCTGGTGCGT
GCGTTCATCG GTGGCTACGC CGCGGCCCGT CCGCAATTCT CCGAGCAGGA GCTCGCAGAC
TCCGTACGCC GCGTCTGGTG GGAACGCCTC ACCGACTTCT GGATCCTGAC GTGGCACTAC
CACCACGCCG ACCACCGCGC GGACTCGCTG TTCCCCGCCA CCGCGGCACT GGTGCCGTGG
TGGACGGAGA ACTACGCAAA GGTCTTGGAC GCCTTCCTGG AAGGCGCCGC GGCGGCTACA
GGTACGGTCC CGCGCCGCTG A
 
Protein sequence
MPGTSGPLQA LFLRFGLPAP TAFRPVDSGL LNRSYQITSA DRRYFLKHYL PWRGIGSGLP 
DAYGRRRSAA QTLRWQHEAV IRLQAAGLPA VAPLRDVHGR TVAYVRGRPF AVFPWNDGVH
RHGRHMHDID ARCLGTTLAD VHTGLARVLP QVPQPLFVPT ASERRAVAEA EQLLAVVDSG
PGRDEMDLLS AHRLRERLAL IPEVAHLRPA PDAVATVGYI HGDFHAGNVM WSALEPGSRV
TAIVDWEKTA VAPCGDEVVS TALVFFTGDY SGQLDLDLVR AFIGGYAAAR PQFSEQELAD
SVRRVWWERL TDFWILTWHY HHADHRADSL FPATAALVPW WTENYAKVLD AFLEGAAAAT
GTVPRR