Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0078 |
Symbol | |
ID | 8331403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 79104 |
End bp | 80204 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953245 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_003110874 |
Protein GI | 256389310 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGGA CATCGGGGCC ACTCCAGGCG CTGTTTCTGC GGTTCGGACT GCCGGCACCG ACCGCTTTCC GGCCTGTCGA CAGCGGACTT CTCAATCGGT CATATCAGAT CACTTCCGCC GATCGCCGCT ACTTCCTGAA GCACTATCTG CCCTGGCGCG GAATCGGCTC CGGACTCCCG GACGCGTACG GTCGCAGGCG CTCCGCAGCG CAGACACTCC GGTGGCAACA CGAAGCCGTG ATCCGATTAC AGGCGGCGGG TCTCCCCGCA GTCGCCCCGC TCAGGGATGT GCACGGCCGT ACGGTCGCCT ATGTGCGGGG ACGCCCTTTT GCAGTATTCC CCTGGAACGA CGGCGTGCAC CGTCACGGCA GACATATGCA CGATATCGAC GCGCGCTGCT TGGGCACCAC GCTCGCCGAC GTCCACACCG GACTGGCGCG CGTTCTCCCC CAAGTCCCGC AGCCGCTGTT CGTCCCCACT GCCTCCGAGC GCCGCGCCGT CGCCGAGGCC GAGCAGCTGC TCGCGGTGGT CGACAGCGGT CCGGGCCGGG ACGAGATGGA CTTGCTCTCC GCACACCGAT TACGGGAGCG CTTAGCGCTC ATCCCCGAAG TCGCGCACCT CCGGCCCGCG CCGGACGCCG TCGCGACTGT CGGCTACATC CACGGCGACT TCCACGCCGG GAACGTCATG TGGTCGGCCC TGGAGCCCGG AAGCCGGGTG ACAGCGATCG TCGACTGGGA GAAGACGGCC GTCGCGCCGT GTGGGGACGA AGTAGTGAGC ACCGCTTTGG TGTTCTTCAC CGGGGACTAC TCAGGTCAGC TCGACCTGGA TCTGGTGCGT GCGTTCATCG GTGGCTACGC CGCGGCCCGT CCGCAATTCT CCGAGCAGGA GCTCGCAGAC TCCGTACGCC GCGTCTGGTG GGAACGCCTC ACCGACTTCT GGATCCTGAC GTGGCACTAC CACCACGCCG ACCACCGCGC GGACTCGCTG TTCCCCGCCA CCGCGGCACT GGTGCCGTGG TGGACGGAGA ACTACGCAAA GGTCTTGGAC GCCTTCCTGG AAGGCGCCGC GGCGGCTACA GGTACGGTCC CGCGCCGCTG A
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Protein sequence | MPGTSGPLQA LFLRFGLPAP TAFRPVDSGL LNRSYQITSA DRRYFLKHYL PWRGIGSGLP DAYGRRRSAA QTLRWQHEAV IRLQAAGLPA VAPLRDVHGR TVAYVRGRPF AVFPWNDGVH RHGRHMHDID ARCLGTTLAD VHTGLARVLP QVPQPLFVPT ASERRAVAEA EQLLAVVDSG PGRDEMDLLS AHRLRERLAL IPEVAHLRPA PDAVATVGYI HGDFHAGNVM WSALEPGSRV TAIVDWEKTA VAPCGDEVVS TALVFFTGDY SGQLDLDLVR AFIGGYAAAR PQFSEQELAD SVRRVWWERL TDFWILTWHY HHADHRADSL FPATAALVPW WTENYAKVLD AFLEGAAAAT GTVPRR
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