Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0026 |
Symbol | |
ID | 8331350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 27626 |
End bp | 28087 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953192 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003110822 |
Protein GI | 256389258 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTACGC GCGTCGTGAC ACCCGGAGTC GTGACCCCCG AAGCGGAAGA GCGCGCCCTC GGCATGGCCT ACGACGTCGT CTATGACGTC CTGCAGGCGC CGTGTCCGTC GCGTCAGGCG CTCGAGCACG TGACCGGCCG CTGGGGTGCG CTGATCATGA TGGCTCTGCG GGAAGGGCCG GTCCGGTTCA ACGAGCTGCG CCGCCGCGTC GACGGCGTGA GCGAGAAGAT GCTGTCCCAA GGGCTTCAAG CCTTGGAGCG GGACGGTTTC GTGGCCCGCG AGGTGCAGTC CACGATGCCG CCGAAGGTCG AGTACCAGCT GACGCCGCTC GGTACGCAGA CCTCGGACCG GCTGGCGGAC CTGGTGGAGT TCCTGGAGGG CCGGATGCCG GAGGTCGAGG CCGCGCAGGC CCGCCATGAT GAGGCCGCCT CCGCCGCCGC CTCGGTGTCC GCTTCCGCGT AG
|
Protein sequence | MSTRVVTPGV VTPEAEERAL GMAYDVVYDV LQAPCPSRQA LEHVTGRWGA LIMMALREGP VRFNELRRRV DGVSEKMLSQ GLQALERDGF VAREVQSTMP PKVEYQLTPL GTQTSDRLAD LVEFLEGRMP EVEAAQARHD EAASAAASVS ASA
|
| |