Gene Caci_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0026 
Symbol 
ID8331350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp27626 
End bp28087 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content70% 
IMG OID644953192 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003110822 
Protein GI256389258 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC GCGTCGTGAC ACCCGGAGTC GTGACCCCCG AAGCGGAAGA GCGCGCCCTC 
GGCATGGCCT ACGACGTCGT CTATGACGTC CTGCAGGCGC CGTGTCCGTC GCGTCAGGCG
CTCGAGCACG TGACCGGCCG CTGGGGTGCG CTGATCATGA TGGCTCTGCG GGAAGGGCCG
GTCCGGTTCA ACGAGCTGCG CCGCCGCGTC GACGGCGTGA GCGAGAAGAT GCTGTCCCAA
GGGCTTCAAG CCTTGGAGCG GGACGGTTTC GTGGCCCGCG AGGTGCAGTC CACGATGCCG
CCGAAGGTCG AGTACCAGCT GACGCCGCTC GGTACGCAGA CCTCGGACCG GCTGGCGGAC
CTGGTGGAGT TCCTGGAGGG CCGGATGCCG GAGGTCGAGG CCGCGCAGGC CCGCCATGAT
GAGGCCGCCT CCGCCGCCGC CTCGGTGTCC GCTTCCGCGT AG
 
Protein sequence
MSTRVVTPGV VTPEAEERAL GMAYDVVYDV LQAPCPSRQA LEHVTGRWGA LIMMALREGP 
VRFNELRRRV DGVSEKMLSQ GLQALERDGF VAREVQSTMP PKVEYQLTPL GTQTSDRLAD
LVEFLEGRMP EVEAAQARHD EAASAAASVS ASA