Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1752 |
Symbol | |
ID | 8323844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1839877 |
End bp | 1840707 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644952884 |
Product | glutamate racemase |
Protein accession | YP_003110341 |
Protein GI | 256372517 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGCTG AGCGCGCGCA CGGCCCCATC GGTGTCTTCG ACTCTGGTTT TGGCGGGCTC AACATCCTCG CGGCGCTGCG CGATCTATTG CCGAGTGAGG ATCTCGTCTA CTTCGGCGAC TCGGCTCGTT CGCCGTACGG ATCGCGGCCT GCCGACGAGG TGGTCCGGTT CTCGCTCGAG ATCGGTCGCT GGCTCGTGGA CGAGGCCGGT TCGAAACTCG TCGTCGTGGG TTGCAATACC GCGTCCGCCG TGGCACTCGA TGCGCTTCGG GCCGAGCTTG CGGTTCCGGT GATCGGCGTG GTCGGGGCGG GGGCGCGCGC GGCGCGCCGG TGCGTCGGGT CCGGTCGTGT CGGCGTGATC GGGACGGAGC GCACGATCGC CTCGGGCGCC TACCAGCGGG CGCTCGCCGA CGATGCGGGC GTCGCCGTCG CCTGTCCTGG ACTCGTCGAG TTCGTGGAGG CAGGCCAGAC GACCGGTCCG GCCGTACGAG CGGTCATCGC GGATCGTCTG GCGCCCGTCG TCGACGCGGG GGTCGAGGTG TTGCTGCTGG GGTGCACGCA CTATCCCTAT CTTGCACGCG AGATTCAAGC GGTGGTCGGC GAGCAGGTGA CGCTCGTGTC GCCGGCAGAG GAGGCGGCGT TCGAGGTCGC ACAGCGACTC GGTGCGGATG GACTGGCACG CTCGGGAGCC GTCGGCTCTT TGCGCGTCGC CTGCAGCGGG GACCCTGTCG TCTTTCGCGA GATCGGCGGT CGCCTGTTCC CTGGGGAGCT CGGCGCGATC GAGCAGGTGC CCGTCGAGGC GCTGGAGTGC CGGCGCACGC GTAGCGCCTA G
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Protein sequence | MAAERAHGPI GVFDSGFGGL NILAALRDLL PSEDLVYFGD SARSPYGSRP ADEVVRFSLE IGRWLVDEAG SKLVVVGCNT ASAVALDALR AELAVPVIGV VGAGARAARR CVGSGRVGVI GTERTIASGA YQRALADDAG VAVACPGLVE FVEAGQTTGP AVRAVIADRL APVVDAGVEV LLLGCTHYPY LAREIQAVVG EQVTLVSPAE EAAFEVAQRL GADGLARSGA VGSLRVACSG DPVVFREIGG RLFPGELGAI EQVPVEALEC RRTRSA
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