Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1339 |
Symbol | |
ID | 8323419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1394297 |
End bp | 1395586 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644952470 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003109938 |
Protein GI | 256372114 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGACCGG CGGTTCCCCC GGCCCTTCGC GAGCCGGGCT TTCGGCTCCT CGTCGCCGGA CAACTCGCAT CCACGCTCGG CGACCTCGCC TACGCAGTCG CTCTGCCTTG GTACGTCCTG GCCCAGCACG ACGGTCCAAT CCTCCTTGCG GCGGTCCTCG CCGCCTACGG GGTGCCTCGC ACCGCGTTCG TCGCGGTGGG CGGCTTCATC GCCGACCGAG TGCGGCCCTG GACCGCCATG CTCATCGCAG ACGGCACGAG AACCGCAGCC GCCGGGCTGC TTGCCGCCGT CGCACTCCAC GGACCGGCAC AACCAGCCGT GCTCATCCCC ATCGCCCTCG TCCTCGGCGC CTGCGAGGGG ATCTTTCTCC CGGCGTCCTT CTCGATCATC CCAGCGCTCA TCGCAGCCGA CCAACTCCAA GGAGCCAACG CGACTTCAAC CGCGGCCACC CAGCTCGCCA CGCTGCTTGG CCCGGCGTTC GGCGGCCTCA TCGTGGGGAT CGCAGGCCCA GGTACCGGCT TCGGCATCGA TGCTGCGACC TTTGCCGTCT CGGCAGGATC GCTCGCGCTC ATCGCTCACC ATCGCACCGA CGACGCGGTC CACTCACACG GTCCGGCCTC GACGAGCACA CGGCAAGCGG GCCCCGCCCC CTCTCCTCCA CTCACGCTTC GGCGCCTCCT CGTGCACGAG CCGGTGCTGC TCCTCATGAT CGCAACCACG GTGGCTGCCA ATCTCGGCCT CGGCGGCCTC AGCGAGGTCG CTCTGCCCGT CTTTGCGCGC ACCACGCTCC ACGCCGATGC CACTGGCTAC GGCGTCATCC TTGCCAGCTT CGGCGCCGGG GGCCTCGTCG GTGCGCTCGC GGCAGCGCGC CTCCCTCGGC TACACCGACC GCTCGTCGTC GGCGGCACCC TCCTCACAAG CGCGACCGTG CTCCTGCTTC TCATGCCCGC AACCGCATCG CTCCCCATCG CCGCGATCGA CCTTGCGGGC TTCAGCGCTC TCCTCGCCGT TGCGAACATC GTCATGGTGA CGGCCGTTCA ACTCTGGGCC GATCCGCGCC TGCTCGGGCG CATCATGAGC ATGATGGTGC TCGCCTCGGT GGGGCTCTTT CCAGTCTCAG TTGCCATCGC CGGTTTCGCG GTACGCGCCA TCGGCGCGTC ACGCTTCGTC GACGTGGCCG GGCTCGCCTT GCTCCTCGCT GCGCTCGCCG TGCTCGCAAC ACCAGCCTCG CGTCGCTTCG CTTCACCACC AGCGGCGCCC GCGCCTGAGC TTGCGGAGCC CGCCGACTAG
|
Protein sequence | MRPAVPPALR EPGFRLLVAG QLASTLGDLA YAVALPWYVL AQHDGPILLA AVLAAYGVPR TAFVAVGGFI ADRVRPWTAM LIADGTRTAA AGLLAAVALH GPAQPAVLIP IALVLGACEG IFLPASFSII PALIAADQLQ GANATSTAAT QLATLLGPAF GGLIVGIAGP GTGFGIDAAT FAVSAGSLAL IAHHRTDDAV HSHGPASTST RQAGPAPSPP LTLRRLLVHE PVLLLMIATT VAANLGLGGL SEVALPVFAR TTLHADATGY GVILASFGAG GLVGALAAAR LPRLHRPLVV GGTLLTSATV LLLLMPATAS LPIAAIDLAG FSALLAVANI VMVTAVQLWA DPRLLGRIMS MMVLASVGLF PVSVAIAGFA VRAIGASRFV DVAGLALLLA ALAVLATPAS RRFASPPAAP APELAEPAD
|
| |